RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 NOS2P35228 1153 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 THPOP40225 353 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 COX10Q12887 443 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 ENKURQ8TC29 256 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 CPB2Q96IY4 423 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 ZCWPW1Q9H0M4 648 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 PLGRKTQ9HBL7 147 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 DDX18Q9NVP1 670 aaKnown RBP21.43■■□□□ 1.02
SH3D19-211ENST00000604030 TPP1O14773 563 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 STX11O75558 287 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 RTN3O95197 1032 aaPredicted RBP21.43■■□□□ 1.02
SH3D19-211ENST00000604030 MYCP01106 439 aaPredicted RBP21.43■■□□□ 1.02
SH3D19-211ENST00000604030 GSTT1P30711 240 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 GRIK3Q13003 919 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 INTS11Q5TA45 600 aaKnown RBP21.43■■□□□ 1.02
SH3D19-211ENST00000604030 DEFB106AQ8N104 65 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 WDR36Q8NI36 951 aaKnown RBP21.43■■□□□ 1.02
SH3D19-211ENST00000604030 HSFY1Q96LI6 401 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 APBA2Q99767 749 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 CCDC167Q9P0B6 97 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 HPCAL1P37235 193 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 TRIM48Q8IWZ4 208 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 CARNMT1Q8N4J0 409 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 TSPAN14Q8NG11 270 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 STAG3L4Q8TBR4 150 aa21.43■■□□□ 1.02
SH3D19-211ENST00000604030 DDTLA6NHG4 134 aaPredicted RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 VTNP04004 478 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 OR56A5P0C7T3 313 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 CCNA2P20248 432 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 TSHZ1Q6ZSZ6 1077 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ZNF276Q8N554 614 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 DCUN1D5Q9BTE7 237 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 OSBPL11Q9BXB4 747 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 RBAK-RBAKDNI3L0D1 243 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SNRPB2P08579 225 aaKnown RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 MRPS22P82650 360 aaKnown RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 TYW3Q6IPR3 259 aaKnown RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 NEPROQ6NW34 567 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ROGDIQ9GZN7 287 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 CRNNQ9UBG3 495 aaPredicted RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 LEF1Q9UJU2 399 aaPredicted RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 RAP2CQ9Y3L5 183 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 NBNO60934 754 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SEC22BO75396 215 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 PCNAP12004 261 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 YBX3P16989 372 aaKnown RBP eCLIP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 PDK3Q15120 406 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ABRAXAS1Q6UWZ7 409 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 REPS2Q8NFH8 660 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 KAT2BQ92831 832 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ZNF670Q9BS34 389 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SPRTNQ9H040 489 aaPredicted RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 REEP1Q9H902 201 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SPAG4Q9NPE6 437 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ETAA1Q9NY74 926 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 CDH9Q9ULB4 789 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 UMODL1Q5DID0 1318 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 DEPDC5O75140 1603 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 A0A0B4J269 797 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ANPEPP15144 967 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ADSSP30520 456 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SREBF2Q12772 1141 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ATAD3BQ5T9A4 648 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 C11orf96Q7Z7L8 435 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SFRP1Q8N474 314 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 LPCAT1Q8NF37 534 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 LNX1Q8TBB1 728 aaPredicted RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 C6orf62Q9GZU0 229 aaPredicted RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 UBP1Q9NZI7 540 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 H3BRB1 525 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 MYL12BO14950 172 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 KCNH1O95259 989 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 TUBP50607 506 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 SCNN1BP51168 640 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 FKBP1CQ5VVH2 108 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 OVOS1Q6IE37 1185 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 ITIH5Q86UX2 942 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 DNAAF5Q86Y56 855 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 MKL1Q969V6 931 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 LENG9Q96B70 501 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 YIPF2Q9BWQ6 316 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 EPB41L4BQ9H329 900 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 TUT1Q9H6E5 874 aaKnown RBP21.42■■□□□ 1.02
SH3D19-211ENST00000604030 PNPLA3Q9NST1 481 aa21.42■■□□□ 1.02
SH3D19-211ENST00000604030 GAKO14976 1311 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 ALOX15BO15296 676 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 SHBGP04278 402 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 PTPN3P26045 913 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 PCBP1Q15365 356 aaKnown RBP eCLIP21.41■■□□□ 1.02
SH3D19-211ENST00000604030 SLC44A2Q8IWA5 706 aaPredicted RBP21.41■■□□□ 1.02
SH3D19-211ENST00000604030 S100ZQ8WXG8 99 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 CERS2Q96G23 380 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 KIF20BQ96Q89 1820 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 PWP1Q13610 501 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 RGS21Q2M5E4 152 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 RFX4Q33E94 735 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 ZNF438Q7Z4V0 828 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 AMER2Q8N7J2 671 aa21.41■■□□□ 1.02
SH3D19-211ENST00000604030 WNT8BQ93098 351 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms