RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 VPS52Q8N1B4 723 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 EXD3Q8N9H8 876 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 CCDC191Q8NCU4 936 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 IL17DQ8TAD2 202 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 INTS12Q96CB8 462 aaKnown RBP4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 ZNF845Q96IR2 970 aaPredicted RBP4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 TTC14Q96N46 770 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 GPR78Q96P69 363 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 FMNL2Q96PY5 1086 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 DEF6Q9H4E7 631 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 IL1RAPL1Q9NZN1 696 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 HSPB7Q9UBY9 170 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 GIMAP2Q9UG22 337 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 SLC25A13Q9UJS0 675 aa4.47□□□□□ -1.69
AC004542.1-201ENST00000602955 C17orf113A0A1B0GUU1 675 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 MCIDASD6RGH6 385 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 H0YIZ8 118 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 GCOM1H8Y6P7 765 aaPredicted RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 DSCR3O14972 297 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 PLSCR1O15162 318 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 BCAT2O15382 392 aaPredicted RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 PAX4O43316 350 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 CNTN5O94779 1100 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 PEX11BO96011 259 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 EIF2S1P05198 315 aaKnown RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 GSTM2P28161 218 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 CPOXP36551 454 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 NNMTP40261 264 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 GARSP41250 739 aaKnown RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 CPA2P48052 419 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 ZNF84P51523 738 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 COPB1P53618 953 aaKnown RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 ADPRHP54922 357 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 ROR1Q01973 937 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 DMWDQ09019 674 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 ABHD18Q0P651 414 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 TMEM115Q12893 351 aaPredicted RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 STK4Q13043 487 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 AIMP2Q13155 320 aaKnown RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 CRYMQ14894 314 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 R3HDM1Q15032 1099 aaKnown RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 MED22Q15528 200 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 GLE1Q53GS7 698 aaKnown RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 C1QTNF12Q5T7M4 302 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 TTI2Q6NXR4 508 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 RNF144BQ7Z419 303 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 TAGAPQ8N103 731 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 SETD9Q8NE22 299 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 MAFAQ8NHW3 353 aaPredicted RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 NEK9Q8TD19 979 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 TFAP2BQ92481 460 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 NELL1Q92832 810 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 KLHL15Q96M94 604 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 Q96MF0 132 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 ZMAT2Q96NC0 199 aaKnown RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 BAG1Q99933 345 aaPredicted RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 ZCCHC4Q9H5U6 513 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 TMEM248Q9NWD8 314 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 PEMTQ9UBM1 199 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 ZNF70Q9UC06 446 aaPredicted RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 DTX4Q9Y2E6 619 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 TESMINQ9Y4I5 508 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 SIRT4Q9Y6E7 314 aaPredicted RBP4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 RUSC2Q8N2Y8 1516 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 MAST3O60307 1309 aa4.46□□□□□ -1.7
AC004542.1-201ENST00000602955 PABPN1LA6NDY0 278 aaKnown RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 MYO1GB0I1T2 1018 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 MASP2O00187 686 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 QSOX1O00391 747 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 FYB1O15117 783 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 ERAL1O75616 437 aaKnown RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 C8AP07357 584 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 RFPL3SP0C7P2 107 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 RARGP13631 454 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 ZNF8P17098 575 aaPredicted RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 TGM2P21980 687 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 TYK2P29597 1187 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 FMO4P31512 558 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 PPARGP37231 505 aaPredicted RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 PBX3P40426 434 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 CLK3P49761 638 aaKnown RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 EEFSECP57772 596 aaKnown RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 CDC16Q13042 620 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 PUM1Q14671 1186 aaKnown RBP eCLIP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 PSMD6Q15008 389 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 AARS2Q5JTZ9 985 aaKnown RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 KAZNQ674X7 775 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 NAA16Q6N069 864 aaPredicted RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 RPUSD3Q6P087 351 aaKnown RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 AADACL2Q6P093 401 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 SLC46A3Q7Z3Q1 461 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 MDGA2Q7Z553 956 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 BCDIN3DQ7Z5W3 292 aaKnown RBP4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 NEK8Q86SG6 692 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 ADGRF2Q8IZF7 708 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 TTC9BQ8N6N2 239 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 FRMD1Q8N878 549 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 TMEM116Q8NCL8 245 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 C11orf65Q8NCR3 313 aa4.45□□□□□ -1.7
AC004542.1-201ENST00000602955 FAM110DQ8TAY7 271 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms