RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 NOMO1Q15155 1222 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 BZW1Q7L1Q6 419 aaKnown RBP20.95■□□□□ 0.94
PNKP-215ENST00000600910 ZNF354CQ86Y25 554 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 RNF135Q8IUD6 432 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 APCDD1Q8J025 514 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 ALG14Q96F25 216 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 OLFM3Q96PB7 478 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 GGA2Q9UJY4 613 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 OR51B4Q9Y5P0 310 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 RAD54BQ9Y620 910 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 PIAS3Q9Y6X2 628 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 VCANP13611 3396 aa20.95■□□□□ 0.94
PNKP-215ENST00000600910 ARHGAP42A6NI28 874 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 PABPC1P11940 636 aaKnown RBP20.94■□□□□ 0.94
PNKP-215ENST00000600910 ETFBP38117 255 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 EIF2DP41214 584 aaKnown RBP20.94■□□□□ 0.94
PNKP-215ENST00000600910 KDSRQ06136 332 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 MESP2Q0VG99 397 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 SLC12A1Q13621 1099 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 TUBB2AQ13885 445 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 IER5LQ5T953 404 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 IL31Q6EBC2 164 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 GRAMD4Q6IC98 578 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 ZC3H18Q86VM9 953 aaKnown RBP20.94■□□□□ 0.94
PNKP-215ENST00000600910 LRRN4Q8WUT4 740 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 C1orf54Q8WWF1 131 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 ATG4AQ8WYN0 398 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 SPON2Q9BUD6 331 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 TUBB2BQ9BVA1 445 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 ATP13A1Q9HD20 1204 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 VPS28Q9UK41 221 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 INTS6Q9UL03 887 aaKnown RBP20.94■□□□□ 0.94
PNKP-215ENST00000600910 SLC27A6Q9Y2P4 619 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 CHD5Q8TDI0 1954 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 KIAA1549LQ6ZVL6 1849 aa20.94■□□□□ 0.94
PNKP-215ENST00000600910 NYNRINQ9P2P1 1898 aaKnown RBP20.94■□□□□ 0.94
PNKP-215ENST00000600910 SPECC1L-ADORA2AF8WAN1 911 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 KRIT1O00522 736 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 MX2P20592 715 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 CTHP32929 405 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 GARSP41250 739 aaKnown RBP20.93■□□□□ 0.94
PNKP-215ENST00000600910 SERINC3Q13530 473 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 GEN1Q17RS7 908 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 PLEKHG6Q3KR16 790 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 PITRM1Q5JRX3 1037 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 ARHGAP36Q6ZRI8 547 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 ATPAF2Q8N5M1 289 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.93■□□□□ 0.94
PNKP-215ENST00000600910 PRELID2Q8N945 189 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 ACE2Q9BYF1 805 aaPredicted RBP20.93■□□□□ 0.94
PNKP-215ENST00000600910 C8orf33Q9H7E9 229 aaPredicted RBP20.93■□□□□ 0.94
PNKP-215ENST00000600910 MIA3Q5JRA6 1907 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.93■□□□□ 0.94
PNKP-215ENST00000600910 MCF2LO15068 1137 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 NCAM2O15394 837 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 PLK1P53350 603 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 EIF3EP60228 445 aaKnown RBP20.93■□□□□ 0.94
PNKP-215ENST00000600910 PDK1Q15118 436 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 WHAMMP3Q1A5X7 153 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 FUT11Q495W5 492 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 B4GALNT4Q76KP1 1039 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 KIAA0907Q7Z7F0 614 aaPredicted RBP20.93■□□□□ 0.94
PNKP-215ENST00000600910 RALGPS2Q86X27 583 aaPredicted RBP20.93■□□□□ 0.94
PNKP-215ENST00000600910 GJD3Q8N144 294 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 AHI1Q8N157 1196 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 PHTF2Q8N3S3 785 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 CCNYQ8ND76 341 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 HDAC11Q96DB2 347 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 PNKPQ96T60 521 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 LGMNQ99538 433 aa20.93■□□□□ 0.94
PNKP-215ENST00000600910 GOLGA6L10A0A0M3HER8 536 aa20.92■□□□□ 0.94
PNKP-215ENST00000600910 PPP1R12AO14974 1030 aaPredicted RBP20.92■□□□□ 0.94
PNKP-215ENST00000600910 GLDCP23378 1020 aa20.92■□□□□ 0.94
PNKP-215ENST00000600910 TXNDC11Q6PKC3 985 aa20.92■□□□□ 0.94
PNKP-215ENST00000600910 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.92■□□□□ 0.94
PNKP-215ENST00000600910 DCAF4L2Q8NA75 395 aa20.92■□□□□ 0.94
PNKP-215ENST00000600910 CD320Q9NPF0 282 aa20.92■□□□□ 0.94
PNKP-215ENST00000600910 IPO11Q9UI26 975 aaKnown RBP20.92■□□□□ 0.94
PNKP-215ENST00000600910 DNPEPQ9ULA0 475 aa20.92■□□□□ 0.94
PNKP-215ENST00000600910 HPCAL4Q9UM19 191 aa20.92■□□□□ 0.94
PNKP-215ENST00000600910 H7C0C1 242 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 CBX4O00257 560 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 KDELR3O43731 214 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 LIASO43766 372 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 MAFKO60675 156 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 RBP3P10745 1247 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 ATP5OP48047 213 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 GALK1P51570 392 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 CKAP4Q07065 602 aaKnown RBP20.91■□□□□ 0.94
PNKP-215ENST00000600910 XRCC4Q13426 336 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 SNX1Q13596 522 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 DMC1Q14565 340 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 CCNG2Q16589 344 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 SLC44A4Q53GD3 710 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 TMEM215Q68D42 235 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 ADIPOR2Q86V24 386 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 LRRC49Q8IUZ0 686 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 TERB1Q8NA31 727 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 SLC35B2Q8TB61 432 aa20.91■□□□□ 0.94
PNKP-215ENST00000600910 TFB1MQ8WVM0 346 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms