RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	GGA2	Q9UJY4	613 aa		22.54	■■□□□ 1.2
LTBP4-227	ENST00000600026	EFR3B	Q9Y2G0	817 aa		22.54	■■□□□ 1.2
LTBP4-227	ENST00000600026	SIT1	Q9Y3P8	196 aa		22.54	■■□□□ 1.2
LTBP4-227	ENST00000600026	ATG2B	Q96BY7	2078 aa		22.54	■■□□□ 1.2
LTBP4-227	ENST00000600026	MUC22	E2RYF6	1773 aa	Predicted RBP	22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	CHD5	Q8TDI0	1954 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026		A0A0A0MRY4	1105 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	TBC1D3B	A6NDS4	549 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026		K7EQS6	105 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	NCAM2	O15394	837 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	PI15	O43692	258 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	DCN	P07585	359 aa	Known RBP	22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	PABPC1	P11940	636 aa	Known RBP	22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	RHOQ	P17081	205 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	IL4R	P24394	825 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	CLCN5	P51795	746 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	ZNF177	Q13360	481 aa	Predicted RBP	22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	KAZN	Q674X7	775 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	CXorf57	Q6NSI4	855 aa	Known RBP	22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	TFAP2D	Q7Z6R9	452 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	WFIKKN2	Q8TEU8	576 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	CLDN23	Q96B33	292 aa		22.53	■■□□□ 1.2
LTBP4-227	ENST00000600026	ANTXRL	A6NF34	631 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	PRRT4	C9JH25	899 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	URI1	O94763	535 aa	Predicted RBP	22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	TJP3	O95049	919 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	ZFX	P17010	805 aa	Predicted RBP	22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	AMPD1	P23109	780 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	CSK	P41240	450 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	SEC13	P55735	322 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	TUBB2A	Q13885	445 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	DPYS	Q14117	519 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	FBXO43	Q4G163	708 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	AADACL2	Q6P093	401 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	NUDT18	Q6ZVK8	323 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	NLRP14	Q86W24	1093 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	MAIP1	Q8WWC4	291 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	NAP1L3	Q99457	506 aa	Predicted RBP	22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	TUBB2B	Q9BVA1	445 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	HEMGN	Q9BXL5	484 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	KIAA1522	Q9P206	1035 aa	Predicted RBP	22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	TBC1D30	Q9Y2I9	924 aa		22.52	■■□□□ 1.2
LTBP4-227	ENST00000600026	PRR33	A8MZF0	331 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	APOL1	O14791	398 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	RNF40	O75150	1001 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	RHOC	P08134	193 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	KRT10	P13645	584 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	ERCC2	P18074	760 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	TNFRSF4	P43489	277 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	LLGL1	Q15334	1064 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	FUT11	Q495W5	492 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	CCDC181	Q5TID7	509 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	TMEM215	Q68D42	235 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026		Q6ZS52	159 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	AHI1	Q8N157	1196 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	SYNPO	Q8N3V7	929 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	RASGEF1C	Q8N431	466 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	TMEM105	Q8N8V8	129 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	OR52K2	Q8NGK3	314 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	PCDH19	Q8TAB3	1148 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	COG1	Q8WTW3	980 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	TMEM248	Q9NWD8	314 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	DLGAP2	Q9P1A6	1054 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	RNF14	Q9UBS8	474 aa		22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	INTS6	Q9UL03	887 aa	Known RBP	22.51	■■□□□ 1.19
LTBP4-227	ENST00000600026	MUC6	Q6W4X9	2439 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	WASH4P	A8MWX3	477 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	CHRM1	P11229	460 aa	Predicted RBP	22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	OR1E1	P30953	314 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	LONRF2	Q1L5Z9	754 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	PITRM1	Q5JRX3	1037 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	TMCO3	Q6UWJ1	677 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	SETD3	Q86TU7	594 aa	Predicted RBP	22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	ADIPOR2	Q86V24	386 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	SLC13A5	Q86YT5	568 aa	Predicted RBP	22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	RTL3	Q8N8U3	475 aa	Known RBP	22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	CHRD	Q9H2X0	955 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	NDFIP2	Q9NV92	336 aa		22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	TTC7A	Q9ULT0	858 aa	Predicted RBP	22.5	■■□□□ 1.19
LTBP4-227	ENST00000600026	PGRMC1	O00264	195 aa	Known RBP	22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	DCLK1	O15075	740 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	ZNF185	O15231	689 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	CST8	O60676	142 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	FGG	P02679	453 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	MZF1	P28698	734 aa	Predicted RBP	22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	SERPINB6	P35237	376 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	PAFAH1B1	P43034	410 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	MAGEA9	P43362	315 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	KIR2DL1	P43626	348 aa	Predicted RBP	22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	RPS9	P46781	194 aa	Known RBP	22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	MAPKAPK2	P49137	400 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	OXCT1	P55809	520 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	DYNLT1	P63172	113 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	SLC12A1	Q13621	1099 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	EIF4H	Q15056	248 aa	Known RBP	22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	PLEKHG6	Q3KR16	790 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	C6orf118	Q5T5N4	469 aa		22.49	■■□□□ 1.19
LTBP4-227	ENST00000600026	EMC10	Q5UCC4	262 aa		22.49	■■□□□ 1.19

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms