RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 KIAA1328Q86T90 577 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 GATAD2AQ86YP4 633 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 CFAP52Q8N1V2 620 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 SLC35F5Q8WV83 523 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 KCTD13Q8WZ19 329 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 PPP1R13BQ96KQ4 1090 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 MRGPRX3Q96LB0 322 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 PRICKLE1Q96MT3 831 aaPredicted RBP14.18□□□□□ -0.14
IRF3-225ENST00000600022 BTBD1Q9H0C5 482 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 UBE2TQ9NPD8 197 aaPredicted RBP14.18□□□□□ -0.14
IRF3-225ENST00000600022 ABCC13Q9NSE7 274 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 AIPL1Q9NZN9 384 aa14.18□□□□□ -0.14
IRF3-225ENST00000600022 KALRNO60229 2985 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 EIF3CLB5ME19 914 aaKnown RBP14.17□□□□□ -0.14
IRF3-225ENST00000600022 SIN3BO75182 1162 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 IGLV3-27P01718 113 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 DNTTP04053 509 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 POLR2EP19388 210 aaKnown RBP14.17□□□□□ -0.14
IRF3-225ENST00000600022 CD27P26842 260 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 PRKCIP41743 596 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 GALCP54803 685 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 SLC8A3P57103 927 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 SHBQ15464 509 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 RAD9BQ6WBX8 426 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 AHI1Q8N157 1196 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 SIX6OS1Q8N1H7 587 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 TTC39CQ8N584 583 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 WFIKKN2Q8TEU8 576 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 SLC6A18Q96N87 628 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
IRF3-225ENST00000600022 CDC6Q99741 560 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 PCED1AQ9H1Q7 454 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 RSPH9Q9H1X1 276 aaPredicted RBP14.17□□□□□ -0.14
IRF3-225ENST00000600022 NEUROG2Q9H2A3 272 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 OLA1Q9NTK5 396 aaKnown RBP14.17□□□□□ -0.14
IRF3-225ENST00000600022 HESX1Q9UBX0 185 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 XPO7Q9UIA9 1087 aaKnown RBP14.17□□□□□ -0.14
IRF3-225ENST00000600022 SLCO3A1Q9UIG8 710 aa14.17□□□□□ -0.14
IRF3-225ENST00000600022 TTC34A8MYJ7 566 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 ACSL4O60488 711 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 VDRP11473 427 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 BRD2P25440 801 aaKnown RBP14.16□□□□□ -0.14
IRF3-225ENST00000600022 EIF4A3P38919 411 aaKnown RBP14.16□□□□□ -0.14
IRF3-225ENST00000600022 CSKP41240 450 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 GRIA4P48058 902 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
IRF3-225ENST00000600022 C9orf64Q5T6V5 341 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 HGSNATQ68CP4 663 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 MSANTD2Q6P1R3 559 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 LCLAT1Q6UWP7 414 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 FAM71AQ8IYT1 594 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 ADAM32Q8TC27 787 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 GANCQ8TET4 914 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 IGSF8Q969P0 613 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 TTC17Q96AE7 1141 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 C16orf45Q96MC5 204 aaPredicted RBP14.16□□□□□ -0.14
IRF3-225ENST00000600022 CHP1Q99653 195 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 DESI2Q9BSY9 194 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 TSGA10Q9BZW7 698 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 DNAI2Q9GZS0 605 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 MIS12Q9H081 205 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 CAAP1Q9H8G2 361 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 OSGEPQ9NPF4 335 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 CNGB3Q9NQW8 809 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 FBXL12Q9NXK8 326 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
IRF3-225ENST00000600022 SETXQ7Z333 2677 aaKnown RBP14.15□□□□□ -0.14
IRF3-225ENST00000600022 A0A1W2PP55 124 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 MID1O15344 667 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 TNFSF14O43557 240 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 PCDHGA12O60330 932 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 TNNT1P13805 278 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 METAP1P53582 386 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 TBX4P57082 545 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 DNAJC3Q13217 504 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 SUZ12Q15022 739 aaKnown RBP14.15□□□□□ -0.14
IRF3-225ENST00000600022 TEAD4Q15561 434 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 SMAD1Q15797 465 aaKnown RBP14.15□□□□□ -0.14
IRF3-225ENST00000600022 ARHGAP44Q17R89 818 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 ZNF776Q68DI1 518 aaPredicted RBP14.15□□□□□ -0.14
IRF3-225ENST00000600022 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 NCEH1Q6PIU2 408 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 TMEM270Q6UE05 265 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 MMAAQ8IVH4 418 aaKnown RBP14.15□□□□□ -0.14
IRF3-225ENST00000600022 SCUBE3Q8IX30 993 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 APCDD1Q8J025 514 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 FIBINQ8TAL6 211 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 FCRL2Q96LA5 508 aaPredicted RBP14.15□□□□□ -0.14
IRF3-225ENST00000600022 FAM129BQ96TA1 746 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.15□□□□□ -0.14
IRF3-225ENST00000600022 PABPC3Q9H361 631 aaKnown RBP14.15□□□□□ -0.14
IRF3-225ENST00000600022 SGK2Q9HBY8 427 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 ARHGAP20Q9P2F6 1191 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 SUN2Q9UH99 717 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 CNTN6Q9UQ52 1028 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 NAALADL1Q9UQQ1 740 aa14.15□□□□□ -0.14
IRF3-225ENST00000600022 PLXNA2O75051 1894 aa14.14□□□□□ -0.15
IRF3-225ENST00000600022 C10orf142B7Z368 130 aa14.14□□□□□ -0.15
IRF3-225ENST00000600022 FOXN3O00409 490 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms