RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 ZYG11BQ9C0D3 744 aa28.92■■■□□ 2.22
ZNF558-206ENST00000599938 TSPY26PQ9H489 355 aa28.92■■■□□ 2.22
ZNF558-206ENST00000599938 TMEM74BQ9NUR3 256 aa28.92■■■□□ 2.22
ZNF558-206ENST00000599938 NUMA1Q14980 2115 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 LNP1A1A4G5 178 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 TARSL2A2RTX5 802 aaKnown RBP28.91■■■□□ 2.22
ZNF558-206ENST00000599938 ATMINO43313 823 aaPredicted RBP28.91■■■□□ 2.22
ZNF558-206ENST00000599938 RNASEH1O60930 286 aaKnown RBP28.91■■■□□ 2.22
ZNF558-206ENST00000599938 TPM3P06753 285 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 OR1E1P30953 314 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 TRIM61Q5EBN2 209 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 PEAR1Q5VY43 1037 aaPredicted RBP28.91■■■□□ 2.22
ZNF558-206ENST00000599938 LRSAM1Q6UWE0 723 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 IQCDQ96DY2 449 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 ZNF419Q96HQ0 510 aaPredicted RBP28.91■■■□□ 2.22
ZNF558-206ENST00000599938 RTKNQ9BST9 563 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 OR12D3Q9UGF7 316 aa28.91■■■□□ 2.22
ZNF558-206ENST00000599938 EVLQ9UI08 416 aaPredicted RBP28.91■■■□□ 2.22
ZNF558-206ENST00000599938 MEI4A8MW99 385 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 DDX3XO00571 662 aaKnown RBP eCLIP28.9■■■□□ 2.225e-7■■■■■ 48
ZNF558-206ENST00000599938 SLC30A4O14863 429 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 DESP17661 470 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 LIMK1P53667 647 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 SYCP2LQ5T4T6 812 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 ARTNQ5T4W7 220 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 DGLUCYQ7Z3D6 616 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 DNAAF5Q86Y56 855 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 RGL4Q8IZJ4 473 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 NTAN1Q96AB6 310 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 CNPY3Q9BT09 278 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 C2orf49Q9BVC5 232 aaPredicted RBP28.9■■■□□ 2.22
ZNF558-206ENST00000599938 PARVAQ9NVD7 372 aa28.9■■■□□ 2.22
ZNF558-206ENST00000599938 PPARGC1AQ9UBK2 798 aaKnown RBP28.9■■■□□ 2.22
ZNF558-206ENST00000599938 GZMAP12544 262 aa28.89■■■□□ 2.22
ZNF558-206ENST00000599938 KRT83P78385 493 aa28.89■■■□□ 2.22
ZNF558-206ENST00000599938 ZBED6P86452 979 aa28.89■■■□□ 2.22
ZNF558-206ENST00000599938 NRG1Q02297 640 aaPredicted RBP28.89■■■□□ 2.22
ZNF558-206ENST00000599938 MANEALQ5VSG8 457 aa28.89■■■□□ 2.22
ZNF558-206ENST00000599938 RWDD4Q6NW29 188 aaKnown RBP28.89■■■□□ 2.22
ZNF558-206ENST00000599938 DCAF4L2Q8NA75 395 aa28.89■■■□□ 2.22
ZNF558-206ENST00000599938 CPLX3Q8WVH0 158 aa28.89■■■□□ 2.22
ZNF558-206ENST00000599938 XPO4Q9C0E2 1151 aaKnown RBP28.89■■■□□ 2.22
ZNF558-206ENST00000599938 OSBPL2Q9H1P3 480 aa28.89■■■□□ 2.22
ZNF558-206ENST00000599938 PABPC3Q9H361 631 aaKnown RBP28.89■■■□□ 2.22
ZNF558-206ENST00000599938 SPTBN2O15020 2390 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 FTLP02792 175 aaPredicted RBP28.88■■■□□ 2.21
ZNF558-206ENST00000599938 CFIP05156 583 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 VAV1P15498 845 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 VASPP50552 380 aaPredicted RBP28.88■■■□□ 2.21
ZNF558-206ENST00000599938 MAMLD1Q13495 774 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 ELAVL3Q14576 367 aaKnown RBP28.88■■■□□ 2.21
ZNF558-206ENST00000599938 CST6Q15828 149 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 ACCSLQ4AC99 568 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 WDR45BQ5MNZ6 344 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 SCYL2Q6P3W7 929 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 RABEPKQ7Z6M1 372 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 MMAAQ8IVH4 418 aaKnown RBP28.88■■■□□ 2.21
ZNF558-206ENST00000599938 STK40Q8N2I9 435 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 CADM4Q8NFZ8 388 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 GANCQ8TET4 914 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 SYN2Q92777 582 aaPredicted RBP28.88■■■□□ 2.21
ZNF558-206ENST00000599938 PTPRN2Q92932 1015 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 PSMB7Q99436 277 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 NUSAP1Q9BXS6 441 aaKnown RBP28.88■■■□□ 2.21
ZNF558-206ENST00000599938 ZNF212Q9UDV6 495 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 VPS51Q9UID3 782 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 CAPN11Q9UMQ6 739 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 SCML1Q9UN30 329 aa28.88■■■□□ 2.21
ZNF558-206ENST00000599938 A0A0D9SEW6 157 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 ATP9BO43861 1147 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 SNAP91O60641 907 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 GYPCP04921 128 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 PSMD8P48556 350 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 IRX4P78413 519 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 OGDHQ02218 1023 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 SCAPQ12770 1279 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 EFHC2Q5JST6 749 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 STPG1Q5TH74 334 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 PLEKHA7Q6IQ23 1121 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 TMC6Q7Z403 805 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 SLFN11Q7Z7L1 901 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 DRC7Q8IY82 874 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 OR7D4Q8NG98 312 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 CEP76Q8TAP6 659 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 FRS2Q8WU20 508 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 ZNF653Q96CK0 615 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 BTBD1Q9H0C5 482 aa28.87■■■□□ 2.21
ZNF558-206ENST00000599938 BZW2Q9Y6E2 419 aaKnown RBP28.87■■■□□ 2.21
ZNF558-206ENST00000599938 ILVBLA1L0T0 632 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 FAM72CH0Y354 149 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 MID1O15344 667 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 RTN2O75298 545 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 LRIG2O94898 1065 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 PLEKP08567 350 aaPredicted RBP28.86■■■□□ 2.21
ZNF558-206ENST00000599938 ACSL1P33121 698 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 NFKBIBQ15653 356 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 DUOXA1Q1HG43 343 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 FAM72AQ5TYM5 149 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 HGSNATQ68CP4 663 aa28.86■■■□□ 2.21
ZNF558-206ENST00000599938 IL31Q6EBC2 164 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms