RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 CACUL1Q86Y37 369 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 CNGA4Q8IV77 575 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 PYROXD2Q8N2H3 581 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 ARFGAP1Q8N6T3 406 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 PSMB7Q99436 277 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 DEF6Q9H4E7 631 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 FBRSQ9HAH7 460 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 SLC25A13Q9UJS0 675 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 NEU3Q9UQ49 428 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 NUMA1Q14980 2115 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 A0A0D9SEW6 157 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 EDDM13A0A1B0GTR0 161 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 ILVBLA1L0T0 632 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 AKR1B15C9JRZ8 316 aaPredicted RBP14.21□□□□□ -0.13
UPF1-205ENST00000598209 SNAP91O60641 907 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 SIN3BO75182 1162 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 CYP1A2P05177 515 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 ACADMP11310 421 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 RHOQP17081 205 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 ZNF75DP51815 510 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 KRT83P78385 493 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 SPEM2Q0P670 501 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 SLC18A3Q16572 532 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 ASTE1Q2TB18 679 aaPredicted RBP14.21□□□□□ -0.13
UPF1-205ENST00000598209 SLC36A4Q6YBV0 504 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 ZNF783Q6ZMS7 281 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 LPCAT2Q7L5N7 544 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 NLRP14Q86W24 1093 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 DCAF4L2Q8NA75 395 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 OR7D4Q8NG98 312 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 ARHGEF26Q96DR7 871 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 CHP1Q99653 195 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 NUP85Q9BW27 656 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 ARRDC1-AS1Q9H2J1 176 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 RETREG1Q9H6L5 497 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 TMEM248Q9NWD8 314 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 GPATCH2LQ9NWQ4 482 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 USP36Q9P275 1121 aaKnown RBP14.21□□□□□ -0.13
UPF1-205ENST00000598209 PCSK1NQ9UHG2 260 aa14.21□□□□□ -0.13
UPF1-205ENST00000598209 GON4LQ3T8J9 2241 aa14.21□□□□□ -0.14
UPF1-205ENST00000598209 PI4KAP42356 2102 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 TARSL2A2RTX5 802 aaKnown RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 CREB3O43889 395 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 AKR1B10O60218 316 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 MIPP30301 263 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 MAPKAPK2P49137 400 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 DHPSP49366 369 aaPredicted RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 TPMTP51580 245 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 RPS14P62263 151 aaKnown RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 RPL6Q02878 288 aaKnown RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 GNA12Q03113 381 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 SEMA3BQ13214 749 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 C9orf64Q5T6V5 341 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 ZNF776Q68DI1 518 aaPredicted RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 TMEFF1Q8IYR6 380 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 KIAA2013Q8IYS2 634 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 PTPRN2Q92932 1015 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 PEBP4Q96S96 227 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 EPAS1Q99814 870 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 NCAPGQ9BPX3 1015 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 SPON2Q9BUD6 331 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 SNRNP25Q9BV90 132 aaKnown RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 C2orf49Q9BVC5 232 aaPredicted RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 NHEJ1Q9H9Q4 299 aaPredicted RBP14.2□□□□□ -0.14
UPF1-205ENST00000598209 PARD6AQ9NPB6 346 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 ITM2CQ9NQX7 267 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 NDFIP2Q9NV92 336 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 DNAI1Q9UI46 699 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 VPS51Q9UID3 782 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 ANAPC7Q9UJX3 599 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 AP4E1Q9UPM8 1137 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 PCDHGA5Q9Y5G8 931 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 GVINP1Q7Z2Y8 2422 aa14.2□□□□□ -0.14
UPF1-205ENST00000598209 ATP9BO43861 1147 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 PRPSAP2O60256 369 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 LRP3O75074 770 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 LRCH4O75427 683 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 C7P10643 843 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 VAV1P15498 845 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 TGM1P22735 817 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 GLDCP23378 1020 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 EPHB2P29323 1055 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 CD6P30203 668 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 CREB5Q02930 508 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 PIGHQ14442 188 aaPredicted RBP14.19□□□□□ -0.14
UPF1-205ENST00000598209 ACAP1Q15027 740 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 CA9Q16790 459 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 ACCSLQ4AC99 568 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 ERMARDQ5T6L9 678 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 DAB2IPQ5VWQ8 1189 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 CYP4V2Q6ZWL3 525 aaPredicted RBP14.19□□□□□ -0.14
UPF1-205ENST00000598209 STK40Q8N2I9 435 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 SH2D3CQ8N5H7 860 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 DEFB119Q8N690 84 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 GPR161Q8N6U8 529 aaKnown RBP14.19□□□□□ -0.14
UPF1-205ENST00000598209 RTL3Q8N8U3 475 aaKnown RBP14.19□□□□□ -0.14
UPF1-205ENST00000598209 TC2NQ8N9U0 490 aa14.19□□□□□ -0.14
UPF1-205ENST00000598209 FRS2Q8WU20 508 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms