RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 UPF3AQ9H1J1 476 aaKnown RBP23.18■■□□□ 1.3
SRRM1-222ENST00000596378 RNPEPL1Q9HAU8 725 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 DNAJC16Q9Y2G8 782 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 NLRC5Q86WI3 1866 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 PTPRDP23468 1912 aa23.18■■□□□ 1.3
SRRM1-222ENST00000596378 A0A0U1RQF3 1178 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 ZNF623O75123 536 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 CYP11A1P05108 521 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 KCNA10Q16322 511 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 STXBP5Q5T5C0 1151 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 GRTP1Q5TC63 336 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 MFSD14CQ5VZR4 134 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 FSTL4Q6MZW2 842 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 DCLRE1AQ6PJP8 1040 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 ACVR1CQ8NER5 493 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 SPATA22Q8NHS9 363 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 DPF3Q92784 378 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 ZNF419Q96HQ0 510 aaPredicted RBP23.17■■□□□ 1.3
SRRM1-222ENST00000596378 RILPQ96NA2 401 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 TRHDEQ9UKU6 1024 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 ADAMTS4O75173 837 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 USP1O94782 785 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 ARRB2P32121 409 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 MAP2K2P36507 400 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 SLC1A6P48664 564 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 FLT3LGP49771 235 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 RCN2Q14257 317 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 DSC3Q14574 896 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 ITPRIPL1Q6GPH6 555 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 TNS4Q8IZW8 715 aa23.17■■□□□ 1.3
SRRM1-222ENST00000596378 TRMT13Q9NUP7 481 aaKnown RBP23.17■■□□□ 1.3
SRRM1-222ENST00000596378 CAPN14A8MX76 684 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 M0QZQ0 153 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 NMBRP28336 390 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 IRF9Q00978 393 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 TUSC3Q13454 348 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 PPP2R5DQ14738 602 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 LBHD1Q9BQE6 289 aaPredicted RBP23.16■■□□□ 1.3
SRRM1-222ENST00000596378 TUBB6Q9BUF5 446 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 BRD8Q9H0E9 1235 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
SRRM1-222ENST00000596378 MTSS1O43312 755 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 B4GALT3O60512 393 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 PGGT1BP53609 377 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 UBAP2LQ14157 1087 aaKnown RBP23.16■■□□□ 1.3
SRRM1-222ENST00000596378 TLDC1Q6P9B6 456 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 C4orf50Q6ZRC1 276 aa23.16■■□□□ 1.3
SRRM1-222ENST00000596378 C20orf96Q9NUD7 363 aaPredicted RBP23.16■■□□□ 1.3
SRRM1-222ENST00000596378 SEPT4O43236 478 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 IGLV3-25P01717 112 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 CCND3P30281 292 aaPredicted RBP23.15■■□□□ 1.3
SRRM1-222ENST00000596378 LIMK2P53671 638 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 SLC5A3P53794 718 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 CACNB2Q08289 660 aaPredicted RBP23.15■■□□□ 1.3
SRRM1-222ENST00000596378 GRIK3Q13003 919 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 KCNMB4Q86W47 210 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 IARS2Q9NSE4 1012 aaKnown RBP23.15■■□□□ 1.3
SRRM1-222ENST00000596378 NDFIP2Q9NV92 336 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 COPG2Q9UBF2 871 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 IRAK2O43187 625 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 MT-CYBP00156 380 aaPredicted RBP23.15■■□□□ 1.3
SRRM1-222ENST00000596378 SLC10A3P09131 477 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 RAB27AP51159 221 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 KDSRQ06136 332 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 WASHC2DQ5SRD0 308 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 RPAINQ86UA6 219 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 CASP10Q92851 521 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 MCUR1Q96AQ8 359 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 PNPOQ9NVS9 261 aa23.15■■□□□ 1.3
SRRM1-222ENST00000596378 ERI2A8K979 691 aaKnown RBP23.14■■□□□ 1.3
SRRM1-222ENST00000596378 PAGE1O75459 146 aa23.14■■□□□ 1.3
SRRM1-222ENST00000596378 TPBGLP0DKB5 382 aa23.14■■□□□ 1.3
SRRM1-222ENST00000596378 SPRP35270 261 aaPredicted RBP23.14■■□□□ 1.3
SRRM1-222ENST00000596378 GRIK1P39086 918 aa23.14■■□□□ 1.3
SRRM1-222ENST00000596378 KHDC1Q4VXA5 237 aaKnown RBP23.14■■□□□ 1.3
SRRM1-222ENST00000596378 FAM91A1Q658Y4 838 aa23.14■■□□□ 1.3
SRRM1-222ENST00000596378 ARHGAP12Q8IWW6 846 aa23.14■■□□□ 1.3
SRRM1-222ENST00000596378 TEX9Q8N6V9 391 aa23.14■■□□□ 1.3
SRRM1-222ENST00000596378 PIWIL2Q8TC59 973 aaKnown RBP23.14■■□□□ 1.3
SRRM1-222ENST00000596378 SORT1Q99523 831 aa23.14■■□□□ 1.3
SRRM1-222ENST00000596378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.14■■□□□ 1.31e-6■□□□□ 11.1
SRRM1-222ENST00000596378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.14■■□□□ 1.29
SRRM1-222ENST00000596378 MOCS2O96007 188 aaPredicted RBP23.14■■□□□ 1.29
SRRM1-222ENST00000596378 SERPINB8P50452 374 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 CAP1Q01518 475 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 PRKCZQ05513 592 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 ITGA9Q13797 1035 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 MAVSQ7Z434 540 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 VAT1Q99536 393 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 OSBPL2Q9H1P3 480 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 ARHGEF38Q9NXL2 777 aa23.14■■□□□ 1.29
SRRM1-222ENST00000596378 PRR5-ARHGAP8B1AHC4 643 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 B2RBV5 119 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 SERPINE1P05121 402 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 MAGEA12P43365 314 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 ARHGAP8P85298 464 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 TSPY1Q01534 308 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 EIF4EBP2Q13542 120 aaPredicted RBP23.13■■□□□ 1.29
SRRM1-222ENST00000596378 SDHAF4Q5VUM1 108 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 BTBD8Q5XKL5 378 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms