RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 MAP7D1Q3KQU3 841 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 CEP68Q76N32 757 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 DCAF4L2Q8NA75 395 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 ZNF564Q8TBZ8 553 aaPredicted RBP18.72■□□□□ 0.59
ZNF558-204ENST00000596172 PEBP4Q96S96 227 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 PSMB7Q99436 277 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 MKRN2Q9H000 416 aaKnown RBP18.72■□□□□ 0.59
ZNF558-204ENST00000596172 PRDM16Q9HAZ2 1276 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 DONSONQ9NYP3 566 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 CTTNBP2NLQ9P2B4 639 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 IMPACTQ9P2X3 320 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 RAB23Q9ULC3 237 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 SMG5Q9UPR3 1016 aaKnown RBP18.72■□□□□ 0.59
ZNF558-204ENST00000596172 WDR87Q6ZQQ6 2873 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 A0A0D9SEW6 157 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 FGF10O15520 208 aaPredicted RBP18.71■□□□□ 0.59
ZNF558-204ENST00000596172 ATP9BO43861 1147 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 GFRA3O60609 400 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 EPHB2P29323 1055 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 HCAR3P49019 387 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 GNA12Q03113 381 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 TCEAL1Q15170 157 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 LAIR1Q6GTX8 287 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 TMPRSS6Q8IU80 811 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 RTL3Q8N8U3 475 aaKnown RBP18.71■□□□□ 0.59
ZNF558-204ENST00000596172 LOXL4Q96JB6 756 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 RPL10LQ96L21 214 aaKnown RBP18.71■□□□□ 0.59
ZNF558-204ENST00000596172 SNRNP25Q9BV90 132 aaKnown RBP18.71■□□□□ 0.59
ZNF558-204ENST00000596172 ACE2Q9BYF1 805 aaPredicted RBP18.71■□□□□ 0.59
ZNF558-204ENST00000596172 MAGEH1Q9H213 219 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 CATSPERBQ9H7T0 1116 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 SLC25A13Q9UJS0 675 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 HS3ST2Q9Y278 367 aa18.71■□□□□ 0.59
ZNF558-204ENST00000596172 EDDM13A0A1B0GTR0 161 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 CREB3O43889 395 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 ZBTB16Q05516 673 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 SLC20A2Q08357 652 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 PLK5Q496M5 336 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 C9orf64Q5T6V5 341 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 USP34Q70CQ2 3546 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.7■□□□□ 0.58
ZNF558-204ENST00000596172 TMTC1Q8IUR5 882 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 RHOT2Q8IXI1 618 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 ZNF366Q8N895 744 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 FRS2Q8WU20 508 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 TEKT4Q8WW24 435 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 PRCCQ92733 491 aaPredicted RBP18.7■□□□□ 0.58
ZNF558-204ENST00000596172 SIPA1Q96FS4 1042 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 BTBD6Q96KE9 485 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 SPACA7Q96KW9 195 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 DHX35Q9H5Z1 703 aaKnown RBP18.7■□□□□ 0.58
ZNF558-204ENST00000596172 ITM2CQ9NQX7 267 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 NDFIP2Q9NV92 336 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 VPS51Q9UID3 782 aa18.7■□□□□ 0.58
ZNF558-204ENST00000596172 MUC22E2RYF6 1773 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 TTC34A8MYJ7 566 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 ZMPSTE24O75844 475 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 MTA2O94776 668 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 RHOBTB1O94844 696 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 PROSCO94903 275 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 IGLV3-19P01714 112 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 IL1R2P27930 398 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 STK19P49842 368 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 CLCN6P51797 869 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 YBEYP58557 167 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 TPI1P60174 286 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 CA9Q16790 459 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 SPDYCQ5MJ68 293 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 RETSATQ6NUM9 610 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 PRR23BQ6ZRT6 265 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 ALYREFQ86V81 257 aaKnown RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 KBTBD6Q86V97 674 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 UMODL1-AS1Q8N2C9 162 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 SH2D3CQ8N5H7 860 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 FAM160A2Q8N612 972 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 OR7D4Q8NG98 312 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 SLC35G2Q8TBE7 412 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 RUBCNQ92622 972 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 ARHGEF2Q92974 986 aaKnown RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 DUSP15Q9H1R2 295 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 RSPH9Q9H1X1 276 aaPredicted RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 GPATCH2LQ9NWQ4 482 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 USP36Q9P275 1121 aaKnown RBP18.69■□□□□ 0.58
ZNF558-204ENST00000596172 DNAI1Q9UI46 699 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 GPR179Q6PRD1 2367 aa18.69■□□□□ 0.58
ZNF558-204ENST00000596172 FRYLO94915 3013 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 DCLK1O15075 740 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 SNAP91O60641 907 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 RAMP2O60895 175 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 SIN3BO75182 1162 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 RETP07949 1114 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 MAN1A1P33908 653 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 CYLC1P35663 651 aaPredicted RBP18.68■□□□□ 0.58
ZNF558-204ENST00000596172 ARHGAP25P42331 645 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 SLC25A11Q02978 314 aaKnown RBP18.68■□□□□ 0.58
ZNF558-204ENST00000596172 POLD3Q15054 466 aaPredicted RBP18.68■□□□□ 0.58
ZNF558-204ENST00000596172 ELF2Q15723 593 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 DPYSL2Q16555 572 aa18.68■□□□□ 0.58
ZNF558-204ENST00000596172 KIAA1324Q6UXG2 1013 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms