RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 GRTP1Q5TC63 336 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
MBD1-227ENST00000592060 DNAAF3Q8N9W5 541 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 TBC1D31Q96DN5 1066 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 ZNF419Q96HQ0 510 aaPredicted RBP16.09■□□□□ 0.17
MBD1-227ENST00000592060 RBBP8Q99708 897 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 TBC1D13Q9NVG8 400 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 OSER1Q9NX31 292 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 SRRDQ9UH36 339 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 ADAM28Q9UKQ2 775 aa16.09■□□□□ 0.17
MBD1-227ENST00000592060 MOXD2PA6NHM9 499 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 PLIN3O60664 434 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 MNAT1P51948 309 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 NRG1Q02297 640 aaPredicted RBP16.08■□□□□ 0.16
MBD1-227ENST00000592060 CDK18Q07002 472 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 N4BP2L1Q5TBK1 243 aaPredicted RBP16.08■□□□□ 0.16
MBD1-227ENST00000592060 AFMIDQ63HM1 303 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 ICE2Q659A1 982 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 ATPAF2Q8N5M1 289 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 SLC43A3Q8NBI5 491 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 URGCPQ8TCY9 931 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 FCRL2Q96LA5 508 aaPredicted RBP16.08■□□□□ 0.16
MBD1-227ENST00000592060 IL12RB2Q99665 862 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 APOL2Q9BQE5 337 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 ABI2Q9NYB9 513 aaPredicted RBP16.08■□□□□ 0.16
MBD1-227ENST00000592060 BAIAP2L1Q9UHR4 511 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 LNPEPQ9UIQ6 1025 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 SOX13Q9UN79 622 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 CENPFP49454 3210 aa16.08■□□□□ 0.16
MBD1-227ENST00000592060 A8MUI8 341 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 DFFAO00273 331 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 PSMD3O43242 534 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 MYL2P10916 166 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 SERPINB3P29508 390 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 PRPSAP1Q14558 356 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 INSCQ1MX18 579 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 HSF5Q4G112 596 aaPredicted RBP16.07■□□□□ 0.16
MBD1-227ENST00000592060 TEDDM1Q5T9Z0 273 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 NAPEPLDQ6IQ20 393 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 C16orf46Q6P387 395 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 SCN4BQ8IWT1 228 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 DCP1BQ8IZD4 617 aaKnown RBP16.07■□□□□ 0.16
MBD1-227ENST00000592060 LZTR1Q8N653 840 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 PRR11Q96HE9 360 aaPredicted RBP16.07■□□□□ 0.16
MBD1-227ENST00000592060 FUBP3Q96I24 572 aaKnown RBP eCLIP16.07■□□□□ 0.16
MBD1-227ENST00000592060 GLT1D1Q96MS3 346 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 RAB3IPQ96QF0 476 aaPredicted RBP16.07■□□□□ 0.16
MBD1-227ENST00000592060 MCMBPQ9BTE3 642 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 SLC39A8Q9C0K1 460 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 C20orf27Q9GZN8 174 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 IL22Q9GZX6 179 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 CATSPERBQ9H7T0 1116 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 ZNF395Q9H8N7 513 aaPredicted RBP16.07■□□□□ 0.16
MBD1-227ENST00000592060 KCNK4Q9NYG8 393 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 DNAJB4Q9UDY4 337 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 SCML2Q9UQR0 700 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 MAFKO60675 156 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 AOC2O75106 756 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 HAUS5O94927 633 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 PROCP04070 461 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 GPR15P49685 360 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 LIMK2P53671 638 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 CDH17Q12864 832 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 FASTKD1Q53R41 847 aaKnown RBP16.07■□□□□ 0.16
MBD1-227ENST00000592060 FAM91A1Q658Y4 838 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 MBLAC2Q68D91 279 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 DCLK2Q8N568 766 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 DNAJC5GQ8N7S2 189 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 MFSD3Q96ES6 412 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 C8orf48Q96LL4 319 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 FBXO6Q9NRD1 293 aaPredicted RBP16.07■□□□□ 0.16
MBD1-227ENST00000592060 NDFIP2Q9NV92 336 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 UBP1Q9NZI7 540 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 TXNDC16Q9P2K2 825 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 DCDC2Q9UHG0 476 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 NUDT5Q9UKK9 219 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 STK38LQ9Y2H1 464 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 HS3ST4Q9Y661 456 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 DOCK4Q8N1I0 1966 aa16.07■□□□□ 0.16
MBD1-227ENST00000592060 MAGEB16A2A368 324 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 ATP9BO43861 1147 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 HNRNPCL1O60812 293 aaKnown RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 FGF3P11487 239 aaPredicted RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 OR1G1P47890 313 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 PDE1BQ01064 536 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 PCLAFQ15004 111 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 SDHAF4Q5VUM1 108 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 STRA8Q7Z7C7 330 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 C14orf80Q86SX3 495 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.06■□□□□ 0.16
MBD1-227ENST00000592060 PTCD3Q96EY7 689 aaKnown RBP16.06■□□□□ 0.16
MBD1-227ENST00000592060 SLC39A13Q96H72 371 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 SERPINB11Q96P15 392 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 FCRL5Q96RD9 977 aa16.06■□□□□ 0.16
MBD1-227ENST00000592060 AGAP2Q99490 1192 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms