RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 RWDD4Q6NW29 188 aaKnown RBP9.44□□□□□ -0.9
DNMT1-223ENST00000591239 SCYL2Q6P3W7 929 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 TMC6Q7Z403 805 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 SLFN11Q7Z7L1 901 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 FAM72BQ86X60 149 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 CACUL1Q86Y37 369 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 VSTM4Q8IW00 320 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 NTAN1Q96AB6 310 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF653Q96CK0 615 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 TRIM11Q96F44 468 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 MAGEB5Q9BZ81 275 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 TRIM7Q9C029 511 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 ARHGAP20Q9P2F6 1191 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF212Q9UDV6 495 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 CNOT8Q9UFF9 292 aaKnown RBP9.44□□□□□ -0.9
DNMT1-223ENST00000591239 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.44□□□□□ -0.9
DNMT1-223ENST00000591239 RALGAPA1Q6GYQ0 2036 aa9.44□□□□□ -0.9
DNMT1-223ENST00000591239 A0A0D9SEW6 157 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 EDDM13A0A1B0GTR0 161 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 ILVBLA1L0T0 632 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 TARSL2A2RTX5 802 aaKnown RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 RNASEH1O60930 286 aaKnown RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 NDUFS2O75306 463 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 LRIG2O94898 1065 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 IGLV3-19P01714 112 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF806P0C7X5 589 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 PSMA2P25787 234 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 CD6P30203 668 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 OXTRP30559 389 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 AIF1P55008 147 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 RPS14P62263 151 aaKnown RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 KRT83P78385 493 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 ZBTB16Q05516 673 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 SF3A2Q15428 464 aaKnown RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 EFHC2Q5JST6 749 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 C6orf118Q5T5N4 469 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF776Q68DI1 518 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 ALKBH5Q6P6C2 394 aaKnown RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 PRR23CQ6ZRP0 262 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 ARMCX6Q7L4S7 300 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 CYP2U1Q7Z449 544 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 DRC7Q8IY82 874 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 PYROXD2Q8N2H3 581 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 DEFB119Q8N690 84 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 OR8K1Q8NGG5 319 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 FRS2Q8WU20 508 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 TOE1Q96GM8 510 aaKnown RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 PSMB7Q99436 277 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 DNAJC7Q99615 494 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 C2orf49Q9BVC5 232 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 RSPH9Q9H1X1 276 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 SMOC1Q9H4F8 434 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 RETREG1Q9H6L5 497 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 MRPL47Q9HD33 250 aaKnown RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 VPS45Q9NRW7 570 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 WSB2Q9NYS7 404 aaPredicted RBP9.43□□□□□ -0.9
DNMT1-223ENST00000591239 MYO1AQ9UBC5 1043 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 SLC25A13Q9UJS0 675 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 FZD10Q9ULW2 581 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 NEU3Q9UQ49 428 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 SCINQ9Y6U3 715 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 GON4LQ3T8J9 2241 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 DOCK4Q8N1I0 1966 aa9.43□□□□□ -0.9
DNMT1-223ENST00000591239 CEP250Q9BV73 2442 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ATP9BO43861 1147 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 FOXD2O60548 495 aaPredicted RBP9.42□□□□□ -0.9
DNMT1-223ENST00000591239 SNAP91O60641 907 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 RNF8O76064 485 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 MT-CO1P00395 513 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 DNTTP04053 509 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 TPM1P09493 284 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 VAV1P15498 845 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 RHOQP17081 205 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ITPKAP23677 461 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 L1CAMP32004 1257 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
DNMT1-223ENST00000591239 GNA12Q03113 381 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 LMNB2Q03252 620 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF33AQ06730 810 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF252P-AS1Q0IIN9 211 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 DLG2Q15700 870 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ACCSLQ4AC99 568 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 CCDC122Q5T0U0 273 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 LYSMD4Q5XG99 296 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 SARM1Q6SZW1 724 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF783Q6ZMS7 281 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 FAM124AQ86V42 546 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 NLRP14Q86W24 1093 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 SYT12Q8IV01 421 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 MMAAQ8IVH4 418 aaKnown RBP9.42□□□□□ -0.9
DNMT1-223ENST00000591239 SLC41A1Q8IVJ1 513 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 STK40Q8N2I9 435 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 SH2D3CQ8N5H7 860 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 ARFGAP1Q8N6T3 406 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 C12orf50Q8NA57 414 aaPredicted RBP9.42□□□□□ -0.9
DNMT1-223ENST00000591239 DCAF4L2Q8NA75 395 aa9.42□□□□□ -0.9
DNMT1-223ENST00000591239 OR7D4Q8NG98 312 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms