RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 NSFP46459 744 aaKnown RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 RNF144AP50876 292 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 IRAK1P51617 712 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 ATXN1P54253 815 aaKnown RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 FANCCQ00597 558 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 SPEM2Q0P670 501 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CDH18Q13634 790 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 AUHQ13825 339 aaKnown RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 ELF2Q15723 593 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 FIGNQ5HY92 759 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 TTC39BQ5VTQ0 682 aaPredicted RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CXorf57Q6NSI4 855 aaKnown RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 SERPINA13PQ6UXR4 307 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 C14orf80Q86SX3 495 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CCAR2Q8N163 923 aaKnown RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CARNMT1Q8N4J0 409 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 EMC1Q8N766 993 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 JOSD2Q8TAC2 188 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 RNF34Q969K3 372 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 IGSF8Q969P0 613 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 ERLEC1Q96DZ1 483 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 MRGPRX3Q96LB0 322 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CFAP57Q96MR6 1250 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 EDEM3Q9BZQ6 932 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 MKRN2Q9H000 416 aaKnown RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 TKTL2Q9H0I9 626 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 SLC6A17Q9H1V8 727 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 PRM3Q9NNZ6 103 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 TMEM51Q9NW97 253 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 ADAM22Q9P0K1 906 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 PCDHGA5Q9Y5G8 931 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CNOT1A5YKK6 2376 aaKnown RBP11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CHD5Q8TDI0 1954 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 CACNA1EQ15878 2313 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 SPTBN2O15020 2390 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 MEN1O00255 615 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 RHOBTB1O94844 696 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 GJB6O95452 261 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 SERPINC1P01008 464 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CALB1P05937 261 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 ATP5BP06576 529 aaKnown RBP11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CCDC172P0C7W6 258 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 HLA-EP13747 358 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CSKP41240 450 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 PRKCIP41743 596 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 SCTRP47872 440 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 COPAP53621 1224 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 DEUP1Q05D60 604 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CAMK2GQ13555 558 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-211ENST00000590499 BYSLQ13895 437 aaKnown RBP11.55□□□□□ -0.56
SMAD4-211ENST00000590499 STARD3Q14849 445 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CSRP2Q16527 193 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 PLEKHG6Q3KR16 790 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CCDC14Q49A88 953 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 RAB6CQ53S08 254 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 PITRM1Q5JRX3 1037 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 RABGAP1LQ5R372 815 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 PRICKLE2Q7Z3G6 844 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 PHLDB2Q86SQ0 1253 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CIR1Q86X95 450 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-211ENST00000590499 C3orf20Q8ND61 904 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CENPIQ92674 756 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-211ENST00000590499 SPACA7Q96KW9 195 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 RAB6CQ9H0N0 254 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 WDCPQ9H6R7 721 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 CD93Q9NPY3 652 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 SEMA4GQ9NTN9 838 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 AIPL1Q9NZN9 384 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 KIAA1522Q9P206 1035 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-211ENST00000590499 USP36Q9P275 1121 aaKnown RBP11.55□□□□□ -0.56
SMAD4-211ENST00000590499 VANGL2Q9ULK5 521 aa11.55□□□□□ -0.56
SMAD4-211ENST00000590499 IGLV3-10A0A075B6K4 115 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 IGHV1OR15-9A0A0B4J2B8 117 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 BCLAF3A2AJT9 711 aaKnown RBP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 ZNF217O75362 1048 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 IGLV3-19P01714 112 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 PROCP04070 461 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 ASLP04424 464 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 EPHX1P07099 455 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 POLR2EP19388 210 aaKnown RBP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 RDXP35241 583 aaKnown RBP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 MPLP40238 635 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 PTPN9P43378 593 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 PLK1P53350 603 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 TPM4P67936 248 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 LMNB2Q03252 620 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 SLC12A1Q13621 1099 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 C15orf59Q2T9L4 293 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 FNDC3BQ53EP0 1204 aaKnown RBP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 SPDYCQ5MJ68 293 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 PRR23CQ6ZRP0 262 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 ZNF571Q7Z3V5 609 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 PGBD3Q8N328 593 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 ZNF366Q8N895 744 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 KDM1BQ8NB78 822 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 OR52K2Q8NGK3 314 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 OR2T3Q8NH03 318 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 RXFP2Q8WXD0 754 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms