RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 INTS6Q9UL03 887 aaKnown RBP6.32□□□□□ -1.4
VPS25-204ENST00000589577 ZNF510Q9Y2H8 683 aa6.32□□□□□ -1.4
VPS25-204ENST00000589577 ATP8B3O60423 1300 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 LRP4O75096 1905 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 A0A087X0B3 334 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 A0A1B0GVL5 298 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 SLC12A8A0AV02 714 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 NEMP2A6NFY4 417 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 PRR19A6NJB7 356 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 D6RAR5 112 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 MUSKO15146 869 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 POLR2DO15514 142 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 RNASEH1O60930 286 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 TBCAO75347 108 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 SMC2O95347 1197 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 MYL1P05976 194 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 ATP5BP06576 529 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 FAM163BP0C2L3 166 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 PRLRP16471 622 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 C5AR1P21730 350 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 MZF1P28698 734 aaPredicted RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 CTSOP43234 321 aaPredicted RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 ARSDP51689 593 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 CASP5P51878 434 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 TAS2R38P59533 333 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 EIF3IQ13347 325 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 SPIDRQ14159 915 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 FZD2Q14332 565 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 DHX8Q14562 1220 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 POSTNQ15063 836 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 DEFB133Q30KQ1 61 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 MPPE1Q53F39 396 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 AGBL4Q5VU57 503 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 GCNT7Q6ZNI0 430 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 CLEC20AQ6ZU45 233 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 ZNF720Q7Z2F6 126 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 TRAPPC11Q7Z392 1133 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 PRPF39Q86UA1 669 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 SLC35F3Q8IY50 421 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 STK40Q8N2I9 435 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 ZNF276Q8N554 614 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 GALNT11Q8NCW6 608 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 TPCN2Q8NHX9 752 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 SLC2A14Q8TDB8 520 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 JPH3Q8WXH2 748 aaPredicted RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 LARP4BQ92615 738 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 JAKMIP2Q96AA8 810 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 TTC17Q96AE7 1141 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 DHX58Q96C10 678 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 TCTN2Q96GX1 697 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 ANKRD36BP1Q96IX9 119 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 EPSTI1Q96J88 318 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 CCDC3Q9BQI4 270 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 MED10Q9BTT4 135 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 BOCQ9BWV1 1114 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 CALN1Q9BXU9 219 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 GTPBP4Q9BZE4 634 aaKnown RBP6.31□□□□□ -1.4
VPS25-204ENST00000589577 DCLK3Q9C098 648 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 SDCBP2Q9H190 292 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 XYLT2Q9H1B5 865 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 ZHX3Q9H4I2 956 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 SMYD3Q9H7B4 428 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 FZD3Q9NPG1 666 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 EVA1BQ9NVM1 165 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 DNAJC28Q9NX36 388 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 DONSONQ9NYP3 566 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 HMGXB4Q9UGU5 601 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 RASAL2Q9UJF2 1139 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 NAGPAQ9UK23 515 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 CROCCQ5TZA2 2017 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 TRPM6Q9BX84 2022 aa6.31□□□□□ -1.4
VPS25-204ENST00000589577 ITIH6Q6UXX5 1313 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 A0A1W2PQC6 194 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 A0A1W2PQM1 296 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 AGRPO00253 132 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SLC31A1O15431 190 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 VPS4BO75351 444 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 ZNF202O95125 648 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 LETM1O95202 739 aaPredicted RBP6.3□□□□□ -1.4
VPS25-204ENST00000589577 KIF20AO95235 890 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 DDAH2O95865 285 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 ADH1BP00325 375 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 LDLRP01130 860 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 TNNC2P02585 160 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SLFN14P0C7P3 912 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 LIFP15018 202 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 VAV1P15498 845 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
VPS25-204ENST00000589577 POLR2EP19388 210 aaKnown RBP6.3□□□□□ -1.4
VPS25-204ENST00000589577 GARTP22102 1010 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 ITGB7P26010 798 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 CCKBRP32239 447 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 ABCD1P33897 745 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 NUDT1P36639 197 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 CSKP41240 450 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 NDUFA8P51970 172 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms