RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 PMF1-BGLAPU3KQ54 211 aa8.32□□□□□ -1.08
ATG4D-210ENST00000588972 MYH9P35579 1960 aaKnown RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 KIAA1671Q9BY89 1806 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TTC3P53804 2025 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 WDR87Q6ZQQ6 2873 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 A0A087WWL8 130 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 A0A1B0GVC2 190 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TCRBV7S2A1N4TA0A589 114 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 LOC730098B7Z3J9 87 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 H3BQV1 296 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 BIN1O00499 593 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TRIM38O00635 465 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 KIAA0391O15091 583 aaKnown RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 CSPG5O95196 566 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 CNOT4O95628 575 aaKnown RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 NDST3O95803 873 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 PYGLP06737 847 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 CSF2RBP32927 897 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 DDIT3P35638 169 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 ZXDAP98168 799 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 SIGLEC14Q08ET2 396 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 COASYQ13057 564 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TBX2Q13207 712 aaPredicted RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 BTG3Q14201 252 aaPredicted RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 PTK2BQ14289 1009 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TAF5Q15542 800 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TBR1Q16650 682 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 MCTP1Q6DN14 999 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 JMJD6Q6NYC1 403 aaPredicted RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 MZT2AQ6P582 158 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 FBXO38Q6PIJ6 1188 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 MOXD1Q6UVY6 613 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 RFX8Q6ZV50 586 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 CCDC60Q8IWA6 550 aaPredicted RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 HSCBQ8IWL3 235 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 SDR16C5Q8N3Y7 309 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 PPHLN1Q8NEY8 458 aaKnown RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 IPO4Q8TEX9 1081 aaKnown RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 GLG1Q92896 1179 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 P2RX5Q93086 422 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 SNX21Q969T3 373 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 LRRC46Q96FV0 321 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 NDC1Q9BTX1 674 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 FOXP1Q9H334 677 aaPredicted RBP8.31□□□□□ -1.08
ATG4D-210ENST00000588972 UNC45AQ9H3U1 944 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 RNPEPQ9H4A4 650 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 GCM1Q9NP62 436 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 KCNMB3Q9NPA1 279 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TBC1D22BQ9NU19 505 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 TBC1D23Q9NUY8 699 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 JKAMPQ9P055 326 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 ZNF212Q9UDV6 495 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 KIF3AQ9Y496 699 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 MYH15Q9Y2K3 1946 aa8.31□□□□□ -1.08
ATG4D-210ENST00000588972 VPS37CA5D8V6 355 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 CXorf49A8MYA2 514 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 PSMD10O75832 226 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 FAM163BP0C2L3 166 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 GHRP10912 638 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 MCM7P33993 719 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 SLC11A2P49281 568 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 GZMKP49863 264 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 GEMIN4P57678 1058 aaKnown RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 HGFACQ04756 655 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 LRP8Q14114 963 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 USP10Q14694 798 aaKnown RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 UGCGQ16739 394 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 DCAF12L1Q5VU92 463 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 USP30Q70CQ3 517 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 TRMT1LQ7Z2T5 733 aaKnown RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 CMTM4Q8IZR5 234 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 MPP5Q8N3R9 675 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 GALNT15Q8N3T1 639 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 GLIS1Q8NBF1 620 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 OR14K1Q8NGZ2 314 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 FNIP1Q8TF40 1166 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 HAS1Q92839 578 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 ZNF689Q96CS4 500 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 ZBTB10Q96DT7 871 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 RPL10LQ96L21 214 aaKnown RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 SPATA25Q9BR10 227 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 PHF7Q9BWX1 381 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 TEKT3Q9BXF9 490 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 SETD4Q9NVD3 440 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 IGSF9Q9P2J2 1179 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 SLC45A2Q9UMX9 530 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 USP15Q9Y4E8 981 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-210ENST00000588972 KAT6AQ92794 2004 aa8.3□□□□□ -1.08
ATG4D-210ENST00000588972 ARID2Q68CP9 1835 aa8.29□□□□□ -1.08
ATG4D-210ENST00000588972 IGKV6D-21A0A0A0MT36 114 aa8.29□□□□□ -1.08
ATG4D-210ENST00000588972 FSD2A1L4K1 749 aa8.29□□□□□ -1.08
ATG4D-210ENST00000588972 RRN3P2A6NIE6 340 aa8.29□□□□□ -1.08
ATG4D-210ENST00000588972 EIF3FO00303 357 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-210ENST00000588972 HYAL3O43820 417 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-210ENST00000588972 NEMFO60524 1076 aa8.29□□□□□ -1.08
ATG4D-210ENST00000588972 SEMA7AO75326 666 aa8.29□□□□□ -1.08
ATG4D-210ENST00000588972 GLP2RO95838 553 aa8.29□□□□□ -1.08
ATG4D-210ENST00000588972 GCFC2P16383 781 aaKnown RBP8.29□□□□□ -1.08
ATG4D-210ENST00000588972 U2AF2P26368 475 aaKnown RBP eCLIP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms