RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 TFAP2BQ92481 460 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 TTC9Q92623 222 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 SLC39A13Q96H72 371 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 MYOCQ99972 504 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 OSBPL2Q9H1P3 480 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 CAAP1Q9H8G2 361 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 USP25Q9UHP3 1055 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 RCOR1Q9UKL0 485 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 CFAP45Q9UL16 551 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 NAALADL1Q9UQQ1 740 aa15.76■□□□□ 0.11
IFT20-216ENST00000588477 NAV2Q8IVL1 2488 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 RP1P56715 2156 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 A0A1B0GVM2 712 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 M0QYV0 167 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 CSO75390 466 aaKnown RBP15.75■□□□□ 0.11
IFT20-216ENST00000588477 DXOO77932 396 aaKnown RBP15.75■□□□□ 0.11
IFT20-216ENST00000588477 ZSCAN22P10073 491 aaPredicted RBP15.75■□□□□ 0.11
IFT20-216ENST00000588477 EPB41P11171 864 aaKnown RBP15.75■□□□□ 0.11
IFT20-216ENST00000588477 CKMT1AP12532 417 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 MYF5P13349 255 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 LSSP48449 732 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 KCNC4Q03721 635 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 DNM1Q05193 864 aaKnown RBP15.75■□□□□ 0.11
IFT20-216ENST00000588477 VAC14Q08AM6 782 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 KCNMA1Q12791 1236 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 CNTN1Q12860 1018 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 ACCSLQ4AC99 568 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 DCAF17Q5H9S7 520 aaPredicted RBP15.75■□□□□ 0.11
IFT20-216ENST00000588477 AGBL4Q5VU57 503 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 TMEM270Q6UE05 265 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 DSG4Q86SJ6 1040 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 CHSY1Q86X52 802 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 UBR7Q8N806 425 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 OR8D1Q8WZ84 308 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 KLK6Q92876 244 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.75■□□□□ 0.11
IFT20-216ENST00000588477 DPH1Q9BZG8 443 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 POLR1BQ9H9Y6 1135 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 COQ4Q9Y3A0 265 aa15.75■□□□□ 0.11
IFT20-216ENST00000588477 CETN3O15182 167 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 SLC31A1O15431 190 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 GIMD1P0DJR0 217 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 PDGFRAP16234 1089 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 TACR2P21452 398 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 DPYDQ12882 1025 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 NNTQ13423 1086 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 SLC12A1Q13621 1099 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 FAM46CQ5VWP2 391 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 ATL3Q6DD88 541 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 FRS2Q8WU20 508 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 FAM149B1Q96BN6 582 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 VCPIP1Q96JH7 1222 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 APOLD1Q96LR9 279 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 ABCG4Q9H172 646 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 ASCL3Q9NQ33 180 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 KLHL11Q9NVR0 708 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 TJP2Q9UDY2 1190 aa15.74■□□□□ 0.11
IFT20-216ENST00000588477 C1QTNF3-AMACRE9PGA6 284 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 RNF225M0QZC1 329 aaPredicted RBP15.73■□□□□ 0.11
IFT20-216ENST00000588477 ARHGAP6O43182 974 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 RNGTTO60942 597 aaKnown RBP15.73■□□□□ 0.11
IFT20-216ENST00000588477 PIAS2O75928 621 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 FBXO21O94952 628 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 CALCAP01258 141 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 APOEP02649 317 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 PAEPP09466 180 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 ALPPL2P10696 532 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 KRT10P13645 584 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 PRLRP16471 622 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 ZNF18P17022 549 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 CMA1P23946 247 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 TBXAS1P24557 533 aaPredicted RBP15.73■□□□□ 0.11
IFT20-216ENST00000588477 SULT2A1Q06520 285 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 CNGA2Q16280 664 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 ZC3H12AQ5D1E8 599 aaKnown RBP15.73■□□□□ 0.11
IFT20-216ENST00000588477 C3orf38Q5JPI3 329 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 SYPL2Q5VXT5 272 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 TAC4Q86UU9 113 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 CIR1Q86X95 450 aaPredicted RBP15.73■□□□□ 0.11
IFT20-216ENST00000588477 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
IFT20-216ENST00000588477 HSFY1Q96LI6 401 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 ZSWIM1Q9BR11 485 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 CALN1Q9BXU9 219 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 THSD1Q9NS62 852 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 PPM1HQ9ULR3 514 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 HPSEQ9Y251 543 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 PCDHB4Q9Y5E5 795 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 PIEZO2Q9H5I5 2752 aa15.73■□□□□ 0.11
IFT20-216ENST00000588477 F5H5T6 163 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 SLC28A2O43868 658 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 BNIP3LO60238 219 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 GP1BAP07359 652 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 BRD2P25440 801 aaKnown RBP15.72■□□□□ 0.11
IFT20-216ENST00000588477 SYKP43405 635 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 PLK1P53350 603 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 TAS2R38P59533 333 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 KIAA1614Q5VZ46 1190 aa15.72■□□□□ 0.11
IFT20-216ENST00000588477 SMYD4Q8IYR2 804 aaPredicted RBP15.72■□□□□ 0.11
IFT20-216ENST00000588477 TMEM145Q8NBT3 493 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms