RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SEC14L1Q92503 715 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 RTP4Q96DX8 246 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 CEP41Q9BYV8 373 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 RAB17Q9H0T7 212 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 RETREG1Q9H6L5 497 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 TRPV4Q9HBA0 871 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 PLK2Q9NYY3 685 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 ASIC3Q9UHC3 531 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 CD207Q9UJ71 328 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 CLEC4EQ9ULY5 219 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 TBC1D30Q9Y2I9 924 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 UTP11Q9Y3A2 253 aaKnown RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
VMP1-207ENST00000588131 TRIOBPQ9H2D6 2365 aa11.58□□□□□ -0.56
VMP1-207ENST00000588131 COL4A3Q01955 1670 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 A0A0D9SEW6 157 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 TYW5A2RUC4 315 aaKnown RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 ARHGAP42A6NI28 874 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 H0Y626 953 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 RNF103O00237 685 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 MYBL2P10244 700 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 CCNCP24863 283 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 GBP2P32456 591 aaPredicted RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 CARSP49589 748 aaKnown RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 YBEYP58557 167 aaPredicted RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 GNA12Q03113 381 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 WASHC5Q12768 1159 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 ZBTB17Q13105 803 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 POLD3Q15054 466 aaPredicted RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 PARP15Q460N3 678 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 RNF43Q68DV7 783 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 TRIM68Q6AZZ1 485 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 WDR93Q6P2C0 686 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 VITQ6UXI7 678 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 SETD3Q86TU7 594 aaPredicted RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 IFT20Q8IY31 132 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 TAB3Q8N5C8 712 aaPredicted RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 CCDC110Q8TBZ0 833 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 OSCP1Q8WVF1 389 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 SUSD6Q92537 303 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 ARHGEF2Q92974 986 aaKnown RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 IRF7Q92985 503 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 TSGA13Q96PP4 275 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 PLA2G2FQ9BZM2 168 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 BRD8Q9H0E9 1235 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 NEUROG2Q9H2A3 272 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 SPHK2Q9NRA0 654 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 DONSONQ9NYP3 566 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 GRHL1Q9NZI5 618 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 SEPT10Q9P0V9 454 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 TBC1D14Q9P2M4 693 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 IPO11Q9UI26 975 aaKnown RBP11.57□□□□□ -0.56
VMP1-207ENST00000588131 RAB21Q9UL25 225 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 CHD5Q8TDI0 1954 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 SHROOM3Q8TF72 1996 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 NUP205Q92621 2012 aa11.57□□□□□ -0.56
VMP1-207ENST00000588131 DOCK8Q8NF50 2099 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 A0A0A0MRY4 1105 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ILVBLA1L0T0 632 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 C5orf60A6NFR6 353 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 J3KR12 359 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 GCATO75600 419 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 PEX11BO96011 259 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 PENKP01210 267 aaPredicted RBP11.56□□□□□ -0.56
VMP1-207ENST00000588131 CYBBP04839 570 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 LAMP2P13473 410 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ARSAP15289 507 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 KCNA5P22460 613 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 PTPN3P26045 913 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 MZF1P28698 734 aaPredicted RBP11.56□□□□□ -0.56
VMP1-207ENST00000588131 TNFRSF8P28908 595 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ECHS1P30084 290 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ADCY8P40145 1251 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 CSKP41240 450 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 IFNAR2P48551 515 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ZNF33AQ06730 810 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 GPS1Q13098 491 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 SERINC3Q13530 473 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 CDH18Q13634 790 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 P3H1Q32P28 736 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 EML3Q32P44 896 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 LY6G5CQ5SRR4 150 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 MPP7Q5T2T1 576 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 FAXCQ5TGI0 409 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 RNF219Q5W0B1 726 aaPredicted RBP11.56□□□□□ -0.56
VMP1-207ENST00000588131 RHBDF2Q6PJF5 856 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 PARM1Q6UWI2 310 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ZDHHC24Q6UX98 284 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 CCNI2Q6ZMN8 369 aaPredicted RBP11.56□□□□□ -0.56
VMP1-207ENST00000588131 LEKR1Q6ZMV7 388 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ZNF354CQ86Y25 554 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 MFN1Q8IWA4 741 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ADGRG2Q8IZP9 1017 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ZNF567Q8N184 647 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 KIAA1958Q8N8K9 716 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 USP33Q8TEY7 942 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 IFT81Q8WYA0 676 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms