RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 HBS1LQ9Y450 684 aaKnown RBP10.44□□□□□ -0.74
APOC1-201ENST00000586638 RAD54BQ9Y620 910 aa10.44□□□□□ -0.74
APOC1-201ENST00000586638 MYLKQ15746 1914 aa10.44□□□□□ -0.74
APOC1-201ENST00000586638 TRIOO75962 3097 aa10.44□□□□□ -0.74
APOC1-201ENST00000586638 C5orf60A6NFR6 353 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 KCNK1O00180 336 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 NRG2O14511 850 aaPredicted RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 NDC80O14777 642 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 CCL16O15467 120 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 RNF40O75150 1001 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 GCATO75600 419 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 CNTN5O94779 1100 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 STK10O94804 968 aaKnown RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 ACSL3O95573 720 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SHBGP04278 402 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 MBL2P11226 248 aaPredicted RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 TACR2P21452 398 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 PTPN3P26045 913 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 PSMB4P28070 264 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SLC6A4P31645 630 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ATP5C1P36542 298 aaKnown RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 GARSP41250 739 aaKnown RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 MLLT6P55198 1093 aaPredicted RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 FOXK2Q01167 660 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 PPIDQ08752 370 aaKnown RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 ZNF844Q08AG5 666 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 WASHC5Q12768 1159 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ZBTB17Q13105 803 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 AUHQ13825 339 aaKnown RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 ALFQ53S48 1182 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 TTMPQ5BVD1 217 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SPDYCQ5MJ68 293 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ANKRD20A2Q5SQ80 823 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 HP1BP3Q5SSJ5 553 aaPredicted RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 ANKRD20A1Q5TYW2 823 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ANKRD20A3Q5VUR7 823 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 NUGGCQ68CJ6 796 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 CES5AQ6NT32 575 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 FBXL22Q6P050 247 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 LILRA6Q6PI73 481 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 CCDC149Q6ZUS6 474 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ITIH5Q86UX2 942 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 HOOK3Q86VS8 718 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 NLRP14Q86W24 1093 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 CCDC13Q8IYE1 715 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 UBALD2Q8IYN6 164 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 LGI2Q8N0V4 545 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 IQCKQ8N0W5 287 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ATPAF2Q8N5M1 289 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 USP33Q8TEY7 942 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SLC22A17Q8WUG5 538 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 IGSF8Q969P0 613 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ARL8AQ96BM9 186 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 PLD4Q96BZ4 506 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 C9orf72Q96LT7 481 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SH3GL2Q99962 352 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 WDR83Q9BRX9 315 aaKnown RBP10.43□□□□□ -0.74
APOC1-201ENST00000586638 FOXP3Q9BZS1 431 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SLC39A8Q9C0K1 460 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 ETNK1Q9HBU6 452 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 TMEM51Q9NW97 253 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SMPD4Q9NXE4 827 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 SLC12A6Q9UHW9 1150 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 MAFFQ9ULX9 164 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 NFS1Q9Y697 457 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 CHD5Q8TDI0 1954 aa10.43□□□□□ -0.74
APOC1-201ENST00000586638 NOTCH4Q99466 2003 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 SMIM23A6NLE4 172 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 WASH4PA8MWX3 477 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 SCAMP3O14828 347 aaKnown RBP10.42□□□□□ -0.74
APOC1-201ENST00000586638 CHADO15335 359 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
APOC1-201ENST00000586638 ACSL4O60488 711 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 STC2O76061 302 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 PDGFBP01127 241 aaPredicted RBP10.42□□□□□ -0.74
APOC1-201ENST00000586638 F11P03951 625 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 MYL4P12829 197 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 RHOQP17081 205 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 MX2P20592 715 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 SP100P23497 879 aaPredicted RBP10.42□□□□□ -0.74
APOC1-201ENST00000586638 GABRR2P28476 465 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 CORO1AP31146 461 aaKnown RBP10.42□□□□□ -0.74
APOC1-201ENST00000586638 CLCN4P51793 760 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 ARL4CP56559 192 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 COG7P83436 770 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 CBX1P83916 185 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 PDIA2Q13087 525 aaKnown RBP10.42□□□□□ -0.74
APOC1-201ENST00000586638 HIF1AQ16665 826 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 KRT71Q3SY84 523 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 BBS9Q3SYG4 887 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 MSS51Q4VC12 460 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 HSP90B2PQ58FF3 399 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 PPM1LQ5SGD2 360 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 FNBP1LQ5T0N5 605 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 RFWD3Q6PCD5 774 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 LRRC31Q6UY01 552 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 CAPN12Q6ZSI9 719 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 CENPUQ71F23 418 aa10.42□□□□□ -0.74
APOC1-201ENST00000586638 TRMT10CQ7L0Y3 403 aaKnown RBP10.42□□□□□ -0.74
APOC1-201ENST00000586638 DENND1CQ8IV53 801 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms