RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 NUMBP49757 651 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 ELAVL3Q14576 367 aaKnown RBP12.72□□□□□ -0.37
SS18-225ENST00000585121 CDO1Q16878 200 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 PPP1R2P3Q6NXS1 205 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
SS18-225ENST00000585121 PHF13Q86YI8 300 aaPredicted RBP12.72□□□□□ -0.37
SS18-225ENST00000585121 STK40Q8N2I9 435 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 MINDY1Q8N5J2 469 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 OR8D1Q8WZ84 308 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 CCDC114Q96M63 670 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 PCDHB18PQ96TA0 734 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
SS18-225ENST00000585121 MYO6Q9UM54 1294 aa12.72□□□□□ -0.37
SS18-225ENST00000585121 TEX33O43247 280 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 FSBPO95073 299 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 SERPINC1P01008 464 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 IL1BP01584 269 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 CEACAM1P13688 526 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 GOT1P17174 413 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 TNFAIP3P21580 790 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 C5AR1P21730 350 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 OR1E1P30953 314 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 PTPN9P43378 593 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 IRAK1P51617 712 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.38
SS18-225ENST00000585121 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.38
SS18-225ENST00000585121 TEAD4Q15561 434 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 DLG2Q15700 870 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 CCDC14Q49A88 953 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 SH3PXD2AQ5TCZ1 1133 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 FAM46CQ5VWP2 391 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 DNAJC24Q6P3W2 148 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 IL27RAQ6UWB1 636 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 STRADAQ7RTN6 431 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 TFAP2DQ7Z6R9 452 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 PTPRN2Q92932 1015 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 FAM129BQ96TA1 746 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 ZYG11BQ9C0D3 744 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 FSCN3Q9NQT6 498 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 MPP6Q9NZW5 540 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 FZD4Q9ULV1 537 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.71□□□□□ -0.38
SS18-225ENST00000585121 SNX10Q9Y5X0 201 aa12.71□□□□□ -0.38
SS18-225ENST00000585121 PI4KAP42356 2102 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 IGLV3-10A0A075B6K4 115 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 A0A1W2PP55 124 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 FAM47DPA6NHR8 397 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 C2CD4BA6NLJ0 364 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 ATP9BO43861 1147 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 GPD1P21695 349 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 ADRA1BP35368 520 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 AFF3P51826 1226 aaKnown RBP12.7□□□□□ -0.38
SS18-225ENST00000585121 GRIK2Q13002 908 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 SLC14A1Q13336 389 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 C15orf59Q2T9L4 293 aaPredicted RBP12.7□□□□□ -0.38
SS18-225ENST00000585121 KLHL40Q2TBA0 621 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 ALFQ53S48 1182 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 N4BP2L1Q5TBK1 243 aaPredicted RBP12.7□□□□□ -0.38
SS18-225ENST00000585121 KIAA0895LQ68EN5 471 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 TRNP1Q6NT89 227 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 ZNF783Q6ZMS7 281 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 BNIPLQ7Z465 357 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 C3orf20Q8ND61 904 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 ALG14Q96F25 216 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 NEUROG2Q9H2A3 272 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 RETREG1Q9H6L5 497 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 ANLNQ9NQW6 1124 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 TMPRSS4Q9NRS4 437 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 DNAAF2Q9NVR5 837 aaKnown RBP12.7□□□□□ -0.38
SS18-225ENST00000585121 ADAMTS1Q9UHI8 967 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 TPX2Q9ULW0 747 aaKnown RBP12.7□□□□□ -0.38
SS18-225ENST00000585121 OR51B4Q9Y5P0 310 aa12.7□□□□□ -0.38
SS18-225ENST00000585121 A0A1W2PQC6 194 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 ILVBLA1L0T0 632 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 UPK3BL1B0FP48 263 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 UPK3BL2E5RIL1 263 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 C1QTNF3-AMACRE9PGA6 284 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 BNIP3LO60238 219 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 CER1O95813 267 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 CD27P26842 260 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 GALCP54803 685 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 CCDC15Q0P6D6 951 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 PTP4A2Q12974 167 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 ASIC2Q16515 512 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 ACAD10Q6JQN1 1059 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
SS18-225ENST00000585121 DCUN1D2Q6PH85 259 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 ADAT2Q7Z6V5 191 aaKnown RBP12.69□□□□□ -0.38
SS18-225ENST00000585121 ZNF683Q8IZ20 524 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 SH2D3CQ8N5H7 860 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 DCAF4L2Q8NA75 395 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 DEFB124Q8NES8 71 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 OR52K2Q8NGK3 314 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 OR2T34Q8NGX1 318 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 OR14C36Q8NHC7 312 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 JOSD2Q8TAC2 188 aa12.69□□□□□ -0.38
SS18-225ENST00000585121 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms