RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SLC39A8Q9C0K1 460 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 KLC2Q9H0B6 622 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 LRRC19Q9H756 370 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 ATP13A1Q9HD20 1204 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 HEBP1Q9NRV9 189 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 HOMER3Q9NSC5 361 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 DTLQ9NZJ0 730 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 CDC23Q9UJX2 597 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 VPS28Q9UK41 221 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 SLC27A6Q9Y2P4 619 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 PIAS3Q9Y6X2 628 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 SPTBN5Q9NRC6 3674 aaKnown RBP18.76■□□□□ 0.59
RFFL-211ENST00000584541 UNC80Q8N2C7 3258 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 TCRBV7S2A1N4TA0A589 114 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 SPECC1L-ADORA2AF8WAN1 911 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 MCF2LO15068 1137 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 PECAM1P16284 738 aaPredicted RBP18.75■□□□□ 0.59
RFFL-211ENST00000584541 CTHP32929 405 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 CD70P32970 193 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 OPRD1P41143 372 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 SLC6A11P48066 632 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 SOX9P48436 509 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 PLK1P53350 603 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 OTUD4Q01804 1114 aaKnown RBP18.75■□□□□ 0.59
RFFL-211ENST00000584541 KDSRQ06136 332 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 CKAP4Q07065 602 aaKnown RBP18.75■□□□□ 0.59
RFFL-211ENST00000584541 GALNT2Q10471 571 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.75■□□□□ 0.59
RFFL-211ENST00000584541 ARHGAP12Q8IWW6 846 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 UBALD2Q8IYN6 164 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 ATPAF2Q8N5M1 289 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.75■□□□□ 0.59
RFFL-211ENST00000584541 OR7D4Q8NG98 312 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 OR52K2Q8NGK3 314 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 ACTL9Q8TC94 416 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 HMCESQ96FZ2 354 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 P2RY13Q9BPV8 354 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 FEM1AQ9BSK4 669 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 C2orf49Q9BVC5 232 aaPredicted RBP18.75■□□□□ 0.59
RFFL-211ENST00000584541 BRD8Q9H0E9 1235 aa18.75■□□□□ 0.59
RFFL-211ENST00000584541 NOL6Q9H6R4 1146 aaKnown RBP18.75■□□□□ 0.59
RFFL-211ENST00000584541 SAE1Q9UBE0 346 aaPredicted RBP18.75■□□□□ 0.59
RFFL-211ENST00000584541 A0A0D9SEW6 157 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 KRIT1O00522 736 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 MAP3K6O95382 1288 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 APODP05090 189 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 CISD3P0C7P0 127 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 MZF1P28698 734 aaPredicted RBP18.74■□□□□ 0.59
RFFL-211ENST00000584541 GARSP41250 739 aaKnown RBP18.74■□□□□ 0.59
RFFL-211ENST00000584541 PAPOLAP51003 745 aaKnown RBP18.74■□□□□ 0.59
RFFL-211ENST00000584541 EIF3EP60228 445 aaKnown RBP18.74■□□□□ 0.59
RFFL-211ENST00000584541 SLC10A2Q12908 348 aaPredicted RBP18.74■□□□□ 0.59
RFFL-211ENST00000584541 XRCC4Q13426 336 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 NOMO1Q15155 1222 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 PLEKHG6Q3KR16 790 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 SLC44A4Q53GD3 710 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 PITRM1Q5JRX3 1037 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 ASTLQ6HA08 431 aaPredicted RBP18.74■□□□□ 0.59
RFFL-211ENST00000584541 DCAF4L2Q8NA75 395 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 CCNYQ8ND76 341 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 SP110Q9HB58 689 aa18.74■□□□□ 0.59
RFFL-211ENST00000584541 HACD1B0YJ81 288 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 H7C0C1 242 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 POLR2EP19388 210 aaKnown RBP18.73■□□□□ 0.59
RFFL-211ENST00000584541 ACVRL1P37023 503 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 ATP5OP48047 213 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 SULT2A1Q06520 285 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 SERINC3Q13530 473 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 MLF2Q15773 248 aaPredicted RBP18.73■□□□□ 0.59
RFFL-211ENST00000584541 WHAMMP3Q1A5X7 153 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 TIGD7Q6NT04 549 aaPredicted RBP18.73■□□□□ 0.59
RFFL-211ENST00000584541 KIAA0907Q7Z7F0 614 aaPredicted RBP18.73■□□□□ 0.59
RFFL-211ENST00000584541 ZC3H18Q86VM9 953 aaKnown RBP18.73■□□□□ 0.59
RFFL-211ENST00000584541 APCDD1Q8J025 514 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 TERB1Q8NA31 727 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 NETO2Q8NC67 525 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 ACDQ96AP0 544 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 HDAC11Q96DB2 347 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 LMLNQ96KR4 655 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 OLFM3Q96PB7 478 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 FERMT1Q9BQL6 677 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 ACE2Q9BYF1 805 aaPredicted RBP18.73■□□□□ 0.59
RFFL-211ENST00000584541 SMARCAL1Q9NZC9 954 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 FBXL21Q9UKT6 434 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 OR51B4Q9Y5P0 310 aa18.73■□□□□ 0.59
RFFL-211ENST00000584541 TBC1D3BA6NDS4 549 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 ZSCAN5CA6NGD5 496 aaPredicted RBP18.72■□□□□ 0.59
RFFL-211ENST00000584541 CBX4O00257 560 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 MAN2B1O00754 1011 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 TRIM24O15164 1050 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 TIMM44O43615 452 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 KDELR3O43731 214 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 ZNF189O75820 626 aaPredicted RBP18.72■□□□□ 0.59
RFFL-211ENST00000584541 KAT7O95251 611 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 GRIA2P42262 883 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 GALK1P51570 392 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 GEMIN4P57678 1058 aaKnown RBP18.72■□□□□ 0.59
RFFL-211ENST00000584541 ZNF33AQ06730 810 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 AP1B1Q10567 949 aa18.72■□□□□ 0.59
RFFL-211ENST00000584541 EIF4HQ15056 248 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms