RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TIMM44O43615 452 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 CREB3O43889 395 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 LRIG2O94898 1065 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 KLF8O95600 359 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 KRT1P04264 644 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 CD48P09326 243 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.222e-7■■■■■ 32.8
CSNK1D-223ENST00000584472 SDHBP21912 280 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 KDELR1P24390 212 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 HLA-FP30511 346 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 ZNF135P52742 658 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 RWDD2BP57060 319 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 KRT81Q14533 505 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 DMC1Q14565 340 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 PDK2Q15119 407 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 RPS6KA1Q15418 735 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 GEN1Q17RS7 908 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 PPP6R3Q5H9R7 873 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 EOGTQ5NDL2 527 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 ZFYVE27Q5T4F4 411 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 LAIR1Q6GTX8 287 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 LRRC31Q6UY01 552 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 NYAP1Q6ZVC0 841 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 KIAA0907Q7Z7F0 614 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 CCDC117Q8IWD4 279 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 CAMKK1Q8N5S9 505 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 ALLCQ8N6M5 410 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 KCTD6Q8NC69 237 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 FIBINQ8TAL6 211 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 TSC1Q92574 1164 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 ALG3Q92685 438 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 IGSF8Q969P0 613 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 EPAS1Q99814 870 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 NCDNQ9UBB6 729 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 NEU3Q9UQ49 428 aa16.42■□□□□ 0.22
CSNK1D-223ENST00000584472 CEP250Q9BV73 2442 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 A0A1B0GVM2 712 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 TCAF2A6NFQ2 919 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 C3orf70A6NLC5 250 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 ENC1O14682 589 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 FOXD2O60548 495 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 SRGAP2O75044 1071 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.226e-6■■■■□ 21
CSNK1D-223ENST00000584472 LUC7L3O95232 432 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 PABPC1P11940 636 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 GOT1P17174 413 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 IL4RP24394 825 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 HOXC13P31276 330 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 HTR7P34969 479 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 TIE1P35590 1138 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 ID4P47928 161 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 DGKEP52429 567 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 CDH18Q13634 790 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 DPYSL3Q14195 570 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 WDR5BQ86VZ2 330 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 MFN1Q8IWA4 741 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 MAP7D3Q8IWC1 876 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 AHI1Q8N157 1196 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 CFAP52Q8N1V2 620 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 CCDC33Q8N5R6 958 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 TXNDC5Q8NBS9 432 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 UCMAQ8WVF2 138 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 TBC1D31Q96DN5 1066 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 RPRD1AQ96P16 312 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 WDR24Q96S15 920 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 ABCB8Q9NUT2 735 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 CWC15Q9P013 229 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 STIM2Q9P246 746 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 RCOR3Q9P2K3 495 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 PPARGC1AQ9UBK2 798 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 GGA2Q9UJY4 613 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 HCN2Q9UL51 889 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 RAB23Q9ULC3 237 aa16.41■□□□□ 0.22
CSNK1D-223ENST00000584472 LRRD1A4D1F6 860 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 H3BRJ5 948 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 SGK1O00141 431 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 EEF2KO00418 725 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ADAM23O75077 832 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 APBB3O95704 486 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 NTSR1P30989 418 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ARL4AP40617 200 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 HCAR3P49019 387 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 DNA2P51530 1060 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 IRAK1P51617 712 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 OXCT1P55809 520 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 TPI1P60174 286 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 MMRN1Q13201 1228 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 CRY1Q16526 586 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 ODF2Q5BJF6 829 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 DCAF12L1Q5VU92 463 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 EGFLAMQ63HQ2 1017 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 CHST9Q7L1S5 443 aa16.4■□□□□ 0.22
CSNK1D-223ENST00000584472 VSIG1Q86XK7 387 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms