RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SPAG5Q96R06 1193 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 TMEM245Q9H330 911 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 ADAMTS1Q9UHI8 967 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 AGO1Q9UL18 857 aaKnown RBP11.9□□□□□ -0.5
NUP85-224ENST00000583948 PAXBP1Q9Y5B6 917 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 ZFC3H1O60293 1989 aaKnown RBP11.9□□□□□ -0.5
NUP85-224ENST00000583948 NBASA2RRP1 2371 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 A0A1B0GVM2 712 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 AGRPO00253 132 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 MID1O15344 667 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 SUV39H1O43463 412 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 PHACTR2O75167 634 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 TACC1O75410 805 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 DNTTP04053 509 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 GP1BBP13224 206 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 FECHP22830 423 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 ACP1P24666 158 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 ADORA2BP29275 332 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 HLA-FP30511 346 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 PIK3CAP42336 1068 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 METAP1P53582 386 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 NXPH1P58417 271 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 ARID5AQ03989 594 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 UBAP2LQ14157 1087 aaKnown RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 SURF1Q15526 300 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 ASIC2Q16515 512 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 POM121L1PQ3SYA9 428 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 C4orf17Q53FE4 359 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 CDCP2Q5VXM1 449 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 CRTC1Q6UUV9 634 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 SV2AQ7L0J3 742 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 FBXL13Q8NEE6 735 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 SNRNP27Q8WVK2 155 aaKnown RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 CHP1Q99653 195 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 NUCKS1Q9H1E3 243 aaKnown RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 PCED1AQ9H1Q7 454 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 GDF3Q9NR23 364 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 TLR8Q9NR97 1041 aaKnown RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 TRMT1Q9NXH9 659 aaKnown RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 FBXL12Q9NXK8 326 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 RASAL2Q9UJF2 1139 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 DNAJC12Q9UKB3 198 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 AJAP1Q9UKB5 411 aaPredicted RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 SRPK3Q9UPE1 567 aa11.89□□□□□ -0.51
NUP85-224ENST00000583948 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
NUP85-224ENST00000583948 HHLA1C9JL84 531 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 TLR4O00206 839 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 PMM2O15305 246 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 OPA1O60313 960 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 MAT2AP31153 395 aaKnown RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 UCNP55089 124 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 TNNC1P63316 161 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 TLE1Q04724 770 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 EFEMP1Q12805 493 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 CLN3Q13286 438 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 TGIF1Q15583 401 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 MEA1Q16626 185 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 ARHGAP44Q17R89 818 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 DUOXA2Q1HG44 320 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 TDRD12Q587J7 1177 aaKnown RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 DPY19L2P1Q6NXN4 242 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 RAD9BQ6WBX8 426 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 ZNF574Q6ZN55 896 aaPredicted RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 CCDC81Q6ZN84 652 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 ATG14Q6ZNE5 492 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 CHST9Q7L1S5 443 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 ADIPOR2Q86V24 386 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 PTRH1Q86Y79 214 aaKnown RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 WDR49Q8IV35 697 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 ARHGEF19Q8IW93 802 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 DDI1Q8WTU0 396 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 SEMA4DQ92854 862 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 ATXN7L3BQ96GX2 97 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 PRR11Q96HE9 360 aaPredicted RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 SERAC1Q96JX3 654 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 MYOCQ99972 504 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 DESI2Q9BSY9 194 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 POLR1BQ9H9Y6 1135 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 CYLDQ9NQC7 956 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
NUP85-224ENST00000583948 ABCB8Q9NUT2 735 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.88□□□□□ -0.51
NUP85-224ENST00000583948 RAB20Q9NX57 234 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
NUP85-224ENST00000583948 USP27XA6NNY8 438 aa11.87□□□□□ -0.51
NUP85-224ENST00000583948 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
NUP85-224ENST00000583948 DFNA5O60443 496 aa11.87□□□□□ -0.51
NUP85-224ENST00000583948 C4BPAP04003 597 aaKnown RBP11.87□□□□□ -0.51
NUP85-224ENST00000583948 NTRK1P04629 796 aa11.87□□□□□ -0.51
NUP85-224ENST00000583948 CYLC1P35663 651 aaPredicted RBP11.87□□□□□ -0.51
NUP85-224ENST00000583948 PLA2G4AP47712 749 aa11.87□□□□□ -0.51
NUP85-224ENST00000583948 LSSP48449 732 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms