RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 VAV1P15498 845 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ZNF18P17022 549 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 EPHA8P29322 1005 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 HNF1BP35680 557 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 GGCXP38435 758 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 SULT1E1P49888 294 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CCR5P51681 352 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ZNF177Q13360 481 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TAF5Q15542 800 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 MAN2A1Q16706 1144 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ZSCAN23Q3MJ62 389 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PTPN20Q4JDL3 420 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TBC1D3GQ6DHY5 549 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TBC1D3CQ6IPX1 549 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 NAPEPLDQ6IQ20 393 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CXorf57Q6NSI4 855 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 OLFML1Q6UWY5 402 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PRPF39Q86UA1 669 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 GATAD2AQ86YP4 633 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ZDHHC17Q8IUH5 632 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TBC1D3Q8IZP1 549 aaPredicted RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 MLKLQ8NB16 471 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CNDP2Q96KP4 475 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PRMT1Q99873 361 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ORAI3Q9BRQ5 295 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 MUC3BQ9H195 1237 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 KDM4CQ9H3R0 1056 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 RRN3Q9NYV6 651 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CNOT1A5YKK6 2376 aaKnown RBP8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CACNA1EQ15878 2313 aa8.96□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PLXNB3Q9ULL4 1909 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CHD8Q9HCK8 2581 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PES1O00541 588 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ENC1O14682 589 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ALOX15BO15296 676 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PLRG1O43660 514 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CLDN11O75508 207 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 RFPL3O75679 317 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 DKK1O94907 266 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 LDOC1O95751 146 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PRKCSHP14314 528 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 MAT2AP31153 395 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 NOS2P35228 1153 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 DRD3P35462 400 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 NUDT1P36639 197 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PLK1P53350 603 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PPP2CBP62714 309 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PPP2CAP67775 309 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 KRT83P78385 493 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 APBA1Q02410 837 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 EIF4EBP2Q13542 120 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 AUHQ13825 339 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 RAPGEF1Q13905 1077 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 POM121L1PQ3SYA9 428 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 SETMARQ53H47 684 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CT47A1Q5JQC4 288 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 KCNT1Q5JUK3 1230 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 BRMS1LQ5PSV4 323 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 SMYD5Q6GMV2 418 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 FBXL22Q6P050 247 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 DHRS13Q6UX07 377 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 RBM43Q6ZSC3 357 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 Q6ZVU0 165 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 SLC26A9Q7LBE3 791 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 MSANTD4Q8NCY6 345 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 NXPE2Q96DL1 559 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 C2orf49Q9BVC5 232 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 NAT10Q9H0A0 1025 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TKTL2Q9H0I9 626 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 EBF2Q9HAK2 575 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PLCB1Q9NQ66 1216 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 DYRK4Q9NR20 520 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 DNAJC12Q9UKB3 198 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 DMTF1Q9Y222 760 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 FARP1Q9Y4F1 1045 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 HS3ST4Q9Y661 456 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 NUMA1Q14980 2115 aa8.95□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TPRP12270 2363 aaKnown RBP8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 ADAMTS20P59510 1910 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 FAM149AA5PLN7 773 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TAF4O00268 1085 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 LATO43561 262 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 RTN2O75298 545 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PAGE1O75459 146 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 WNT1P04628 370 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PNMA6AP0CW24 399 aaPredicted RBP8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 PON1P27169 355 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 VASPP50552 380 aaPredicted RBP8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 IRAK1P51617 712 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CDH4P55283 916 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 NXPH1P58417 271 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 BPIFB4P59827 614 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 SLC6A3Q01959 620 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 DEUP1Q05D60 604 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 TYRO3Q06418 890 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 CCDC15Q0P6D6 951 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 KCNJ12Q14500 433 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 STAT4Q14765 748 aa8.94□□□□□ -0.98
CDK5RAP3-229ENST00000583697 SMAD1Q15797 465 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms