RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ADH1CP00326 375 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TYRP14679 529 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 GALNT2Q10471 571 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 XRCC4Q13426 336 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RUNX3Q13761 415 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PDK1Q15118 436 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 FSCBQ5H9T9 825 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CXorf57Q6NSI4 855 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ZNF783Q6ZMS7 281 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 C12orf50Q8NA57 414 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 OR52K2Q8NGK3 314 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ATG4AQ8WYN0 398 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MAGOHBQ96A72 148 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 LMLNQ96KR4 655 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 OLFM3Q96PB7 478 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KCNK12Q9HB15 430 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RBM12Q9NTZ6 932 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 IGSF9Q9P2J2 1179 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 FBXO10Q9UK96 956 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 DNPEPQ9ULA0 475 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 DRG1Q9Y295 367 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ZFHX2Q9C0A1 2572 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CTAGE15A4D2H0 777 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 OTOL1A6NHN0 477 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RASA4BC9J798 803 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 NEDD8-MDP1E9PL57 170 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ARNTLO00327 626 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 NCAM2O15394 837 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RASA4O43374 803 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 LIASO43766 372 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 GFRA3O60609 400 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RAMP2O60895 175 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PHF2O75151 1096 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MAP3K6O95382 1288 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RHOCP08134 193 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CTAGE8P0CG41 777 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ADH5P11766 374 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MX2P20592 715 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 COILP38432 576 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PAPOLAP51003 745 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 EIF3EP60228 445 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TNK2Q07912 1038 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 NR1H3Q13133 447 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SNX1Q13596 522 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 POLD3Q15054 466 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CTAGE6Q86UF2 777 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 LRRC49Q8IUZ0 686 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MFN1Q8IWA4 741 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CCDC117Q8IWD4 279 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CTAGE4Q8IX94 777 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SLC44A3Q8N4M1 653 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CCDC33Q8N5R6 958 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 WFDC5Q8TCV5 224 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ARHGEF2Q92974 986 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 NKD2Q969F2 451 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 BRD8Q9H0E9 1235 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MAGEH1Q9H213 219 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KIAA1522Q9P206 1035 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MYO15AQ9UKN7 3530 aa16.75■□□□□ 0.27
CDK5RAP3-228ENST00000583363 A0A0D9SEW6 157 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ARHGAP42A6NI28 874 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 HACD1B0YJ81 288 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 H0Y858 1186 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 H7C0C1 242 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MCF2LO15068 1137 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RBP3P10745 1247 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CHRNA3P32297 505 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ACVRL1P37023 503 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 GARSP41250 739 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ATP5OP48047 213 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KCNJ1P48048 391 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 OXCT1P55809 520 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 GNA12Q03113 381 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 C2orf54Q08AI8 447 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CDH18Q13634 790 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 BYSLQ13895 437 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 GAB4Q2WGN9 574 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PARP15Q460N3 678 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 RNF219Q5W0B1 726 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ZC3H18Q86VM9 953 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CPA6Q8N4T0 437 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ZNF557Q8N988 423 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ATL2Q8NHH9 583 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ATOH1Q92858 354 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ALG14Q96F25 216 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 HMCESQ96FZ2 354 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 TSGA13Q96PP4 275 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 XPO6Q96QU8 1125 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 SLC2A11Q9BYW1 496 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 OR51B4Q9Y5P0 310 aa16.74■□□□□ 0.27
CDK5RAP3-228ENST00000583363 KIF26AQ9ULI4 1882 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 BCLAF3A2AJT9 711 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 DFFAO00273 331 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PPP1R12AO14974 1030 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CACNG3O60359 315 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CISD3P0C7P0 127 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 MZF1P28698 734 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 FNTAP49354 379 aa16.73■□□□□ 0.27
CDK5RAP3-228ENST00000583363 PLK1P53350 603 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms