RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.76□□□□□ -1.33
TVP23B-209ENST00000581733 ALG3Q92685 438 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 MCRS1Q96EZ8 462 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 HSFY1Q96LI6 401 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 CCDC140Q96MF4 163 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 CPXM1Q96SM3 734 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 KRT12Q99456 494 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 HNRNPABQ99729 332 aaKnown RBP6.76□□□□□ -1.33
TVP23B-209ENST00000581733 SYT15Q9BQS2 421 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
TVP23B-209ENST00000581733 MED10Q9BTT4 135 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 MRPL9Q9BYD2 267 aaKnown RBP6.76□□□□□ -1.33
TVP23B-209ENST00000581733 RAB17Q9H0T7 212 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 CXCL16Q9H2A7 254 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 NOL6Q9H6R4 1146 aaKnown RBP6.76□□□□□ -1.33
TVP23B-209ENST00000581733 DDX43Q9NXZ2 648 aaKnown RBP6.76□□□□□ -1.33
TVP23B-209ENST00000581733 EHD2Q9NZN4 543 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 CHORDC1Q9UHD1 332 aaPredicted RBP6.76□□□□□ -1.33
TVP23B-209ENST00000581733 CDH9Q9ULB4 789 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 ALPK3Q96L96 1907 aa6.76□□□□□ -1.33
TVP23B-209ENST00000581733 SHROOM3Q8TF72 1996 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 TRAV20A0A0B4J274 112 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 CASTOR2A6NHX0 329 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 E5RJQ4 531 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 M0QZQ0 153 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 HRKO00198 91 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 GABRDO14764 452 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PQBP1O60828 265 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 FBXO21O94952 628 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 HEXIM1O94992 359 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 ZRANB2O95218 330 aaKnown RBP eCLIP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 POMCP01189 267 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 FAM200BP0CF97 657 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 CCDC130P13994 396 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PTPN1P18031 435 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PTPN7P35236 360 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 RFC2P35250 354 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 GJC1P36383 396 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 CTSKP43235 329 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 MARCKSL1P49006 195 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 EPHB4P54760 987 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 RNASE9P60153 205 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 RPL7AP62424 266 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 FAM189BP81408 668 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SLC6A3Q01959 620 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 GPS2Q13227 327 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 CUL1Q13616 776 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SMC1AQ14683 1233 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PKN2Q16513 984 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 C2CD6Q53TS8 623 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 MDH1BQ5I0G3 518 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 EFHC1Q5JVL4 640 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 DCAF12L1Q5VU92 463 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 WSCD1Q658N2 575 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 CC2D1AQ6P1N0 951 aaPredicted RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 FBXO46Q6PJ61 603 aaPredicted RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 FAM183BPQ6ZVS7 135 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 ARCQ7LC44 396 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 ANKRD33Q7Z3H0 272 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PHLDB2Q86SQ0 1253 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 TMEM110Q86TL2 294 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 OSTM1Q86WC4 334 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 TTC30AQ86WT1 665 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SLC13A5Q86YT5 568 aaPredicted RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SCUBE1Q8IWY4 988 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 KLHL7Q8IXQ5 586 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SIX6OS1Q8N1H7 587 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 C12orf29Q8N999 325 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 EIF1ADQ8N9N8 165 aaKnown RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 LINC01356Q8N9X3 169 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 GSTCDQ8NEC7 633 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SLC2A14Q8TDB8 520 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 MZB1Q8WU39 189 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SLC35F5Q8WV83 523 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 LINC01599Q8WXQ3 324 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 KRT35Q92764 455 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PPP1R14AQ96A00 147 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SMARCD1Q96GM5 515 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PWWP2AQ96N64 755 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PNKPQ96T60 521 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 CNPY3Q9BT09 278 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 TRIM62Q9BVG3 475 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 DUSP16Q9BY84 665 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 HIPK3Q9H422 1215 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 MIOSQ9NXC5 875 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 SMARCAL1Q9NZC9 954 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 FEZ2Q9UHY8 353 aaPredicted RBP6.75□□□□□ -1.33
TVP23B-209ENST00000581733 CYTH4Q9UIA0 394 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 PCDHB7Q9Y5E2 793 aa6.75□□□□□ -1.33
TVP23B-209ENST00000581733 DENND4CQ5VZ89 1909 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 ESYT3A0FGR9 886 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 NDC80O14777 642 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 PRPSAP2O60256 369 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 B3GAT3O94766 335 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 TJP3O95049 919 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 GAS8O95995 478 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 SCG5P05408 212 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 PFKMP08237 780 aa6.74□□□□□ -1.33
TVP23B-209ENST00000581733 PDGFRAP16234 1089 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms