RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNF347Q96SE7 839 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 TM2D2Q9BX73 214 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 IL21RQ9HBE5 538 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 SLC22A11Q9NSA0 550 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 TUBA8Q9NY65 449 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 ARHGAP26Q9UNA1 814 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 GDAQ9Y2T3 454 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 SPATA31A5Q5VU36 1347 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 SPATA31A7Q8IWB4 1347 aa5.15□□□□□ -1.59
SMCHD1-205ENST00000581383 MOSPD3O75425 235 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 RNF8O76064 485 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 IFIT1P09914 478 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 CYP4B1P13584 511 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 AKR1A1P14550 325 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 PKMP14618 531 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 ST6GAL1P15907 406 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 HOXB9P17482 250 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 TNFAIP3P21580 790 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 TACR3P29371 465 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 MVDP53602 400 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 SSBP2P81877 361 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 GOLGA8FQ08AF8 430 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 DDX10Q13206 875 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 TDGQ13569 410 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 ZNF260Q3ZCT1 412 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 ARL13AQ5H913 290 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 SLC9C2Q5TAH2 1124 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 LIPMQ5VYY2 423 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 SLC30A9Q6PML9 568 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 RBM44Q6ZP01 1051 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 RNF144BQ7Z419 303 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 MDGA2Q7Z553 956 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 SCN4BQ8IWT1 228 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 UEVLDQ8IX04 471 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 TCP11L2Q8N4U5 519 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 EXD3Q8N9H8 876 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 C2CD4CQ8TF44 421 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 CUL5Q93034 780 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 RNFT2Q96EX2 444 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 ADAD1Q96M93 576 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 FBXO4Q9UKT5 387 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 SUFUQ9UMX1 484 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 EMSYQ7Z589 1322 aa5.14□□□□□ -1.59
SMCHD1-205ENST00000581383 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 CCDC196A0A1B0GTZ2 297 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 SMIM35A0A1B0GVV1 85 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 MYMKA6NI61 221 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 MCIDASD6RGH6 385 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 METTL18O95568 372 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 HOXB6P17509 224 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 PRKCHP24723 683 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 GSTM2P28161 218 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 ELF1P32519 619 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 DDIT3P35638 169 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 SOX2P48431 317 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 RPS6KA3P51812 740 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 ADPRHP54922 357 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 ARHGAP8P85298 464 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 MPP1Q00013 466 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 TBL3Q12788 808 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 TRIP6Q15654 476 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 NFIL3Q16649 462 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 SH2D4BQ5SQS7 431 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 ZNF474Q6S9Z5 364 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 RTL10Q7L3V2 364 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 MAATS1Q7Z4T9 603 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 BRSK2Q8IWQ3 736 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 NANOGP1Q8N7R0 232 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 C9orf106Q8NAJ2 232 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 FAM110DQ8TAY7 271 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 ZNF398Q8TD17 642 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 ST8SIA4Q92187 359 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 IP6K1Q92551 441 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 P2RY11Q96G91 374 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 PHF7Q9BWX1 381 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 PRSS22Q9GZN4 317 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 SPRTNQ9H040 489 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 PAIP1Q9H074 479 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 TAOK3Q9H2K8 898 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 MLXIPLQ9NP71 852 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 PDGFCQ9NRA1 345 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 TRNAU1APQ9NX07 287 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 ARL15Q9NXU5 204 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 CD207Q9UJ71 328 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 TBX20Q9UMR3 447 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 PKP3Q9Y446 797 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 WDR17Q8IZU2 1322 aa5.13□□□□□ -1.59
SMCHD1-205ENST00000581383 SH2D7A6NKC9 451 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 INPPL1O15357 1258 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 MBD4O95243 580 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 LATS1O95835 1130 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 PLAUP00749 431 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 SNHG28P0DPA3 235 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 SCP2P22307 547 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 KRT9P35527 623 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 PSMC2P35998 433 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 OAZ1P54368 228 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 GALNT2Q10471 571 aa5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 BYSLQ13895 437 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-205ENST00000581383 ZNF268Q14587 947 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms