RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TRPM5Q9NZQ8 1165 aa13.01□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NEU3Q9UQ49 428 aa13.01□□□□□ -0.33
CDK5RAP3-217ENST00000580287 DOCK6Q96HP0 2047 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MYO16Q9Y6X6 1858 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NDC80O14777 642 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ATP5C1P36542 298 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TUBP50607 506 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MSS51Q4VC12 460 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MS4A13Q5J8X5 152 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 HECTD3Q5T447 861 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RAP1GAP2Q684P5 730 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RFWD3Q6PCD5 774 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TFAP2DQ7Z6R9 452 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PIGWQ7Z7B1 504 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PSTKQ8IV42 348 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PALM2Q8IXS6 379 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 C4orf33Q8N1A6 199 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 C12orf65Q9H3J6 166 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NKIRAS1Q9NYS0 192 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PATJQ8NI35 1801 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CCT8L1PA6NM43 557 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 KCNK1O00180 336 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CNTN5O94779 1100 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TMEM63AO94886 807 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GLUD1P00367 558 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TGM2P21980 687 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GABRR2P28476 465 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MLLT6P55198 1093 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 LACTB2Q53H82 288 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ADGRD2Q7Z7M1 963 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PDIK1LQ8N165 341 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CFAP52Q8N1V2 620 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ARL14EPQ8N8R7 260 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 FBXO36Q8NEA4 188 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MYRFLQ96LU7 910 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 EPAS1Q99814 870 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CORO1BQ9BR76 489 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PRDM12Q9H4Q4 367 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 IL21Q9HBE4 155 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SAMD15Q9P1V8 674 aa13□□□□□ -0.33
CDK5RAP3-217ENST00000580287 A0A1W2PRU2 124 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 EPOPA6NHQ4 379 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 E9PAM4 449 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ALOX15BO15296 676 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TCEA3O75764 348 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 KLKB1P03952 638 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ABHD2P08910 425 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 VAV1P15498 845 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 STX2P32856 288 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CLCN4P51793 760 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 AP1B1Q10567 949 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PPP2R5DQ14738 602 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 EFTUD2Q15029 972 aaKnown RBP eCLIP12.99□□□□□ -0.337e-16■□□□□ 10
CDK5RAP3-217ENST00000580287 ALFQ53S48 1182 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 BRMS1LQ5PSV4 323 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 ARHGAP36Q6ZRI8 547 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 C3orf62Q6ZUJ4 267 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 KIF2BQ8N4N8 673 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NAT8LQ8N9F0 302 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MAGEC3Q8TD91 643 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 IGSF8Q969P0 613 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 POM121Q96HA1 1249 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 HAPLN3Q96S86 360 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 EMILIN2Q9BXX0 1053 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SMG9Q9H0W8 520 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NKX2-4Q9H2Z4 354 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 RAB6BQ9NRW1 208 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TRIM33Q9UPN9 1127 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CHMP2BQ9UQN3 213 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 LRG1P02750 347 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 F11P03951 625 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 CCR2P41597 374 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 XRCC4Q13426 336 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GPM6BQ13491 265 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 TBC1D1Q86TI0 1168 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 DENND1CQ8IV53 801 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MAB21L3Q8N8X9 362 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MIEF2Q96C03 454 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 OSBPL2Q9H1P3 480 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 LGALS13Q9UHV8 139 aa12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 UBOX5O94941 541 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 APOEP02649 317 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 MYL4P12829 197 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 GCAP28676 217 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 STIP1P31948 543 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 FOXN2P32314 431 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 PHBP35232 272 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 AIF1P55008 147 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 NTHL1P78549 312 aa12.98□□□□□ -0.33
CDK5RAP3-217ENST00000580287 E2F5Q15329 346 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms