RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 CD38P28907 300 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 GNA15P30679 374 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 PSMD8P48556 350 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 ZNF165P49910 485 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 SULT2A1Q06520 285 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 PDCLQ13371 301 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 MAN2A1Q16706 1144 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 VWA3BQ502W6 1294 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 TCP11X2Q5H9J9 407 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 CCAR2Q8N163 923 aaKnown RBP12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 STK40Q8N2I9 435 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 PPP1R9BQ96SB3 815 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 VPS16Q9H269 839 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 AK5Q9Y6K8 562 aa12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 TDRD6O60522 2096 aaKnown RBP12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 COL5A1P20908 1838 aaPredicted RBP12.95□□□□□ -0.34
SMARCD2-207ENST00000578234 A0A1W2PR77 199 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 BECN2A8MW95 431 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 YKT6O15498 198 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 LATO43561 262 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 IL1BP01584 269 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 WNT1P04628 370 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 CDK11BP21127 795 aaKnown RBP12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 CCR1P32246 355 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 DRD3P35462 400 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 STK19P49842 368 aaPredicted RBP12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 ADPRHP54922 357 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 CDK17Q00537 523 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 MTA1Q13330 715 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 KRT31Q15323 416 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 TAF5Q15542 800 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 EFHC1Q5JVL4 640 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 RABGAP1LQ5R372 815 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 CDKAL1Q5VV42 579 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 TRIM65Q6PJ69 517 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 EID2Q8N6I1 236 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 OR14C36Q8NHC7 312 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 FRS2Q8WU20 508 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 FAM131CQ96AQ9 280 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 SPAG5Q96R06 1193 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 KDM4CQ9H3R0 1056 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 CBX8Q9HC52 389 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 ACP6Q9NPH0 428 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 GDF3Q9NR23 364 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 DDIT4Q9NX09 232 aa12.94□□□□□ -0.34
SMARCD2-207ENST00000578234 LOC400499M0QZD8 3231 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SYNJ2BP-COX16A0A087WUM0 186 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3DA0A087WVF3 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3IA0A087WXS9 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3EA0A087X179 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3KA0A087X1G2 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3FA6NER0 549 aaPredicted RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SMTNL1A8MU46 457 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3LB9A6J9 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 E9PAM4 449 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 CBX4O00257 560 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 PLK4O00444 970 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 WNT9AO14904 365 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 BNIP3LO60238 219 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 LDOC1O95751 146 aaPredicted RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 C1SP09871 688 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3HP0C7X1 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 CDK4P11802 303 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 PDGFRAP16234 1089 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SLC9A1P19634 815 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 EEF1GP26641 437 aaKnown RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 ARRB1P49407 418 aaPredicted RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 CLDN6P56747 220 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SEMG2Q02383 582 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 APBA1Q02410 837 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SHBQ15464 509 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SOWAHCQ53LP3 525 aaPredicted RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SLC45A4Q5BKX6 768 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 MIIPQ5JXC2 388 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3GQ6DHY5 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3CQ6IPX1 549 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 CXorf57Q6NSI4 855 aaKnown RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 FBXL22Q6P050 247 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 DSG4Q86SJ6 1040 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 LUZP1Q86V48 1076 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TMPRSS12Q86WS5 348 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 TBC1D3Q8IZP1 549 aaPredicted RBP12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 DEFB106AQ8N104 65 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 PIP4K2CQ8TBX8 421 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SAP25Q8TEE9 199 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SHC3Q92529 594 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 RNF34Q969K3 372 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 ALG14Q96F25 216 aa12.93□□□□□ -0.34
SMARCD2-207ENST00000578234 SERAC1Q96JX3 654 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms