RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SYT1P21579 422 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 DCAF6Q58WW2 860 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 MS4A13Q5J8X5 152 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 AGBL4Q5VU57 503 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 FAM46CQ5VWP2 391 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 CRTC1Q6UUV9 634 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 USP53Q70EK8 1073 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 DSG4Q86SJ6 1040 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 TMEM145Q8NBT3 493 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 KIAA0895Q8NCT3 520 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 OR13H1Q8NG92 308 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 EXTL1Q92935 676 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 AZIN2Q96A70 460 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 FAM131CQ96AQ9 280 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 DUSP23Q9BVJ7 150 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 MAGEF1Q9HAY2 307 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 USP29Q9HBJ7 922 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 STARD5Q9NSY2 213 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 DNAJC28Q9NX36 388 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 ANKMY1Q9P2S6 941 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 TJP2Q9UDY2 1190 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 PCDHGA8Q9Y5G5 932 aa16.79■□□□□ 0.28
CTDNEP1-211ENST00000575783 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 CDRT15L2A8MXV6 281 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 GJB6O95452 261 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 MOCS2O96007 188 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 KRT13P13646 458 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 ZNF18P17022 549 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 CLDN2P57739 230 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 DAOAP59103 153 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 BST2Q10589 180 aaKnown RBP16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 ZNF177Q13360 481 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 ACCSLQ4AC99 568 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 MSANTD2Q6P1R3 559 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 RBM44Q6ZP01 1051 aaKnown RBP16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 EFL1Q7Z2Z2 1120 aaKnown RBP16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 OR8D1Q8WZ84 308 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 SEMA4DQ92854 862 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 GRAMD1AQ96CP6 724 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 NOX5Q96PH1 765 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 CNGB3Q9NQW8 809 aa16.78■□□□□ 0.28
CTDNEP1-211ENST00000575783 BSNQ9UPA5 3926 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 A0A1W2PQU0 124 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 FAM87AP0C7U9 286 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 CD19P15391 556 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 AKT2P31751 481 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 RGS7P49802 495 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 NUCB2P80303 420 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 GUSBP11Q6P575 273 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 LGI2Q8N0V4 545 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 WDR36Q8NI36 951 aaKnown RBP16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 FRS2Q8WU20 508 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 PREBQ9HCU5 417 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 EXOC1Q9NV70 894 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 PPP4R2Q9NY27 417 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 PPM1HQ9ULR3 514 aa16.77■□□□□ 0.28
CTDNEP1-211ENST00000575783 C1QTNF3-AMACRE9PGA6 284 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 CALUO43852 315 aaPredicted RBP16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 BNIP3LO60238 219 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 LZTS3O60299 673 aaPredicted RBP16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 CUTAO60888 179 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 PPP6R2O75170 966 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 AFPP02771 609 aaKnown RBP16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 NEFLP07196 543 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 PDGFRAP16234 1089 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 ITGB6P18564 788 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 TAS2R38P59533 333 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 XKR5Q6UX68 686 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 SLC22A18ASQ8N1D0 253 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 KCTD13Q8WZ19 329 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 SGF29Q96ES7 293 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 FCRL2Q96LA5 508 aaPredicted RBP16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 SEPT3Q9UH03 358 aa16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 ATXN7L1Q9ULK2 861 aaPredicted RBP16.76■□□□□ 0.27
CTDNEP1-211ENST00000575783 RELNP78509 3460 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 KLRC4O43908 158 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 HNRNPKP61978 463 aaKnown RBP eCLIP16.75■□□□□ 0.273e-48■■■■■ 50.4
CTDNEP1-211ENST00000575783 ZNF284Q2VY69 593 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 RAP1GAP2Q684P5 730 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 KRT39Q6A163 491 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 OR6B2Q6IFH4 312 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 ZCCHC8Q6NZY4 707 aaKnown RBP16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 Q6ZSR6 202 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 CLEC14AQ86T13 490 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 FAM186BQ8IYM0 893 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 CLEC4CQ8WTT0 213 aa16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 XPO7Q9UIA9 1087 aaKnown RBP16.75■□□□□ 0.27
CTDNEP1-211ENST00000575783 USP9XQ93008 2570 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 CASC3O15234 703 aaKnown RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 MAPK13O15264 365 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 LTFP02788 710 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 HNRNPA2B1P22626 353 aaKnown RBP16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 NR2F2P24468 414 aa16.74■□□□□ 0.27
CTDNEP1-211ENST00000575783 INHBCP55103 352 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms