RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 USP29Q9HBJ7 922 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 DMGDHQ9UI17 866 aaKnown RBP24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 TBC1D30Q9Y2I9 924 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 NUP205Q92621 2012 aa24.63■■□□□ 1.53
ATPAF1-213ENST00000574428 A0A0D9SEW6 157 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 ZSCAN5CA6NGD5 496 aaPredicted RBP24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 NEDD8-MDP1E9PL57 170 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 HEXIM1O94992 359 aaKnown RBP24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 H2AFXP16104 143 aaPredicted RBP24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 ACVRL1P37023 503 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 CDH18Q13634 790 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 ANO4Q32M45 955 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 EML3Q32P44 896 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 MPP7Q5T2T1 576 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 MFN1Q8IWA4 741 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 KIAA1958Q8N8K9 716 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 BBS2Q9BXC9 721 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 ANKZF1Q9H8Y5 726 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 CLEC4EQ9ULY5 219 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 NEU2Q9Y3R4 380 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 FAM187AA6NFU0 413 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 MBTPS2O43462 519 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 ZSCAN5DPP0CG00 497 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 GNA12Q03113 381 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 GRM2Q14416 872 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 PARP15Q460N3 678 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 HEATR6Q6AI08 1181 aaKnown RBP24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 OTOP3Q7RTS5 596 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 SETD3Q86TU7 594 aaPredicted RBP24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 ZNF354CQ86Y25 554 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 OR7D4Q8NG98 312 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 HLA-CQ95604 372 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 E2F7Q96AV8 911 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 SEPT10Q9P0V9 454 aa24.62■■□□□ 1.53
ATPAF1-213ENST00000574428 ARHGAP42A6NI28 874 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 CYP17A1P05093 508 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 ARSAP15289 507 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 VPS41P49754 854 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 YBEYP58557 167 aaPredicted RBP24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 RNF219Q5W0B1 726 aaPredicted RBP24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 RHBDF2Q6PJF5 856 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 CCDC89Q8N998 374 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 HTR3CQ8WXA8 447 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 ARHGEF2Q92974 986 aaKnown RBP24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 ELSPBP1Q96BH3 223 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 TRIM31Q9BZY9 425 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 BRD8Q9H0E9 1235 aa24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 THG1LQ9NWX6 298 aaKnown RBP24.61■■□□□ 1.53
ATPAF1-213ENST00000574428 CFAP69A5D8W1 941 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 KCNK1O00180 336 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 MAFKO60675 156 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 PENKP01210 267 aaPredicted RBP24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 KRT14P02533 472 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 GUCY2DQ02846 1103 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 RNF43Q68DV7 783 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 MFSD6LQ8IWD5 586 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 EBF3Q9H4W6 596 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 EPS15L1Q9UBC2 864 aa24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 IPO11Q9UI26 975 aaKnown RBP24.6■■□□□ 1.53
ATPAF1-213ENST00000574428 ILVBLA1L0T0 632 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 TYRP14679 529 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 STIP1P31948 543 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 FCHO2Q0JRZ9 810 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 SERINC3Q13530 473 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 PTK6Q13882 451 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 DHCR24Q15392 516 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 MTERF4Q7Z6M4 381 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 CCDC13Q8IYE1 715 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 TSGA13Q96PP4 275 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 SPON2Q9BUD6 331 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 RPP25Q9BUL9 199 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 CEP41Q9BYV8 373 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 MUC3BQ9H195 1237 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 MAGEH1Q9H213 219 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 ASIC3Q9UHC3 531 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 KIF26AQ9ULI4 1882 aaPredicted RBP24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 ESYT3A0FGR9 886 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 RNF103O00237 685 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 CLCN6P51797 869 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 SYDE1Q6ZW31 735 aaPredicted RBP24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 YAF2Q8IY57 180 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 PNKPQ96T60 521 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 FAM83CQ9BQN1 747 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 ERP44Q9BS26 406 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 MARK1Q9P0L2 795 aa24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 UTP11Q9Y3A2 253 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-213ENST00000574428 J3KR12 359 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 CCNCP24863 283 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 MZF1P28698 734 aaPredicted RBP24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 CSKP41240 450 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 TNK2Q07912 1038 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 IL31Q6EBC2 164 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 MTSS1LQ765P7 747 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 LRRC49Q8IUZ0 686 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 CCDC117Q8IWD4 279 aaPredicted RBP24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 ATP2A3Q93084 1043 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 RTP4Q96DX8 246 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 PARD6BQ9BYG5 372 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 RAB17Q9H0T7 212 aa24.58■■□□□ 1.53
ATPAF1-213ENST00000574428 DPH5Q9H2P9 285 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms