RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CSADQ9Y600 493 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 MPOP05164 745 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 PTPN3P26045 913 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 SNAPC2Q13487 334 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 DPYSQ14117 519 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 KIZQ2M2Z5 673 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 CERCAMQ5T4B2 595 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 POTEAQ6S8J7 498 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 TMC7Q7Z402 723 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 PIGZQ86VD9 579 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 ELP3Q9H9T3 547 aa19.46■□□□□ 0.71
SCARF1-206ENST00000573852 KLHL33A6NCF5 533 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 KPNA7A9QM74 516 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 FAM72CH0Y354 149 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 OR6B1O95007 311 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 AP2A1O95782 977 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 PGGT1BP53609 377 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 LAMC2Q13753 1193 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 DCAF4L1Q3SXM0 396 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 FAM72AQ5TYM5 149 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 FAM72DQ6L9T8 149 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 FAM72BQ86X60 149 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 DNAAF3Q8N9W5 541 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 NAT14Q8WUY8 206 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 OXSMQ9NWU1 459 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 MATN2O00339 956 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 EEF2KO00418 725 aaKnown RBP19.45■□□□□ 0.7
SCARF1-206ENST00000573852 DCLK1O15075 740 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 AMHP03971 560 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 THRAP10827 490 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 EPHA3P29320 983 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 MSX2P35548 267 aaPredicted RBP19.45■□□□□ 0.7
SCARF1-206ENST00000573852 BRCA1P38398 1863 aaKnown RBP19.45■□□□□ 0.7
SCARF1-206ENST00000573852 RPL26P61254 145 aaKnown RBP19.45■□□□□ 0.7
SCARF1-206ENST00000573852 TMEM62Q0P6H9 643 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 NME3Q13232 169 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 LSM12Q3MHD2 195 aaKnown RBP19.45■□□□□ 0.7
SCARF1-206ENST00000573852 MARCH8Q5T0T0 291 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 SYPL2Q5VXT5 272 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 DCUN1D1Q96GG9 259 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 C16orf70Q9BSU1 422 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 ILKAPQ9H0C8 392 aaPredicted RBP19.45■□□□□ 0.7
SCARF1-206ENST00000573852 PRDM16Q9HAZ2 1276 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 BFARQ9NZS9 450 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 COMMD3-BMI1R4GMX3 469 aa19.45■□□□□ 0.7
SCARF1-206ENST00000573852 C15orf38-AP3S2A0A0A6YYH1 394 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 M0QYT0 321 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 ATP9BO43861 1147 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 NDUFV1P49821 464 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 THOP1P52888 689 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 MAMDC4Q6UXC1 1216 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 ARMCX2Q7L311 632 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 ARPINQ7Z6K5 226 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 DSELQ8IZU8 1212 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 NT5C3BQ969T7 300 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 NPY6RQ99463 290 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 CASS4Q9NQ75 786 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 RGSL1A5PLK6 1076 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 GOLGA8TH3BQL2 631 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 PGM3O95394 542 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 SMIM18P0DKX4 95 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 RPS6KA3P51812 740 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 LSAMPQ13449 338 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 FBXO47Q5MNV8 452 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 BNIPLQ7Z465 357 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 KYQ8NBH2 561 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 RNF169Q8NCN4 708 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 SLC7A14Q8TBB6 771 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 ADAM32Q8TC27 787 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 CDRT15Q96T59 188 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 APOL2Q9BQE5 337 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 SNX25Q9H3E2 840 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 VCX3AQ9NNX9 186 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 PIGVQ9NUD9 493 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 C6orf203Q9P0P8 240 aaPredicted RBP19.44■□□□□ 0.7
SCARF1-206ENST00000573852 PCDHGB4Q9UN71 923 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 PCDHGB5Q9Y5G0 923 aa19.44■□□□□ 0.7
SCARF1-206ENST00000573852 TK2O00142 265 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 ZBTB24O43167 697 aaPredicted RBP19.43■□□□□ 0.7
SCARF1-206ENST00000573852 AP1G1O43747 822 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 DAB1O75553 588 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 XRCC1P18887 633 aaPredicted RBP19.43■□□□□ 0.7
SCARF1-206ENST00000573852 MPP3Q13368 585 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 TAPT1Q6NXT6 567 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 ISLR2Q6UXK2 745 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 TMEM151AQ8N4L1 468 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 CNDP1Q96KN2 507 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 MCMBPQ9BTE3 642 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 NXF3Q9H4D5 531 aaKnown RBP19.43■□□□□ 0.7
SCARF1-206ENST00000573852 CHRAC1Q9NRG0 131 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 UBAP1Q9NZ09 502 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 PRPF19Q9UMS4 504 aaKnown RBP19.43■□□□□ 0.7
SCARF1-206ENST00000573852 RALGAPA2Q2PPJ7 1873 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 OTOFQ9HC10 1997 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 XPO1O14980 1071 aaKnown RBP19.43■□□□□ 0.7
SCARF1-206ENST00000573852 DNAJA2O60884 412 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 BEST1O76090 585 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 SBK3P0C264 359 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 AKAP5P24588 427 aa19.43■□□□□ 0.7
SCARF1-206ENST00000573852 CD68P34810 354 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms