RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 OPHN1O60890 802 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 F9P00740 461 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 SYPP08247 313 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 METAP1P53582 386 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 CDH4P55283 916 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 OXCT1P55809 520 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 FAM193AP78312 1265 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 DEUP1Q05D60 604 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 TYRO3Q06418 890 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 ZNF252P-AS1Q0IIN9 211 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 TTC31Q49AM3 519 aaPredicted RBP17.92■□□□□ 0.46
SMG6-214ENST00000573827 FKBP15Q5T1M5 1219 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 MMAAQ8IVH4 418 aaKnown RBP17.92■□□□□ 0.46
SMG6-214ENST00000573827 EMC1Q8N766 993 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 CFAP57Q96MR6 1250 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 ZDHHC5Q9C0B5 715 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 SIK2Q9H0K1 926 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 MIR1-1HGQ9H1L0 117 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 EBF2Q9HAK2 575 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 FBXL12Q9NXK8 326 aa17.92■□□□□ 0.46
SMG6-214ENST00000573827 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.91■□□□□ 0.46
SMG6-214ENST00000573827 GOLGA6L22H0YM25 854 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 DRD3P35462 400 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 STAT1P42224 750 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 GALCP54803 685 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 GSCP56915 257 aaPredicted RBP17.91■□□□□ 0.46
SMG6-214ENST00000573827 SLC14A1Q13336 389 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 ZNF177Q13360 481 aaPredicted RBP17.91■□□□□ 0.46
SMG6-214ENST00000573827 ELAVL3Q14576 367 aaKnown RBP17.91■□□□□ 0.46
SMG6-214ENST00000573827 JOSD2Q8TAC2 188 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 SLC30A5Q8TAD4 765 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 SYT11Q9BT88 431 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 NEUROG2Q9H2A3 272 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 IL21RQ9HBE5 538 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 ANGPTL2Q9UKU9 493 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 SARDHQ9UL12 918 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 FZD4Q9ULV1 537 aa17.91■□□□□ 0.46
SMG6-214ENST00000573827 A0A1W2PP55 124 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 TCRBV5S1A1TA0A578 114 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 C2CD4BA6NLJ0 364 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 GJB6O95452 261 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 TOP3BO95985 862 aaKnown RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 MT-CO1P00395 513 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 CD27P26842 260 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 SLC8A1P32418 973 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 ATXN3P54252 364 aaPredicted RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 CCDC14Q49A88 953 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 KCNT1Q5JUK3 1230 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 MANEALQ5VSG8 457 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 RNF219Q5W0B1 726 aaPredicted RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 TRIM72Q6ZMU5 477 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 PHF13Q86YI8 300 aaPredicted RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 CENPIQ92674 756 aaPredicted RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 HAPLN3Q96S86 360 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 C11orf70Q9BRQ4 267 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 TM9SF3Q9HD45 589 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 METTL5Q9NRN9 209 aaKnown RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 TMEM51Q9NW97 253 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 MPP6Q9NZW5 540 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 NEU3Q9UQ49 428 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 HS3ST2Q9Y278 367 aa17.9■□□□□ 0.46
SMG6-214ENST00000573827 FNDC3AQ9Y2H6 1198 aaKnown RBP17.9■□□□□ 0.46
SMG6-214ENST00000573827 A0A0D9SEW6 157 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 A0A1B0GVT2 93 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 E9PAM4 449 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 SNAP91O60641 907 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 CBFA2T3O75081 653 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 PSMD8P48556 350 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 CSNK1EP49674 416 aaKnown RBP17.89■□□□□ 0.45
SMG6-214ENST00000573827 UBXN1Q04323 297 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 DLG2Q15700 870 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 CLEC16AQ2KHT3 1053 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 KIF19Q2TAC6 998 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 KIAA0895LQ68EN5 471 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 NCEH1Q6PIU2 408 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 DBX2Q6ZNG2 339 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 PHLDB2Q86SQ0 1253 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 SETD3Q86TU7 594 aaPredicted RBP17.89■□□□□ 0.45
SMG6-214ENST00000573827 FAM131BQ86XD5 332 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 HDDC3Q8N4P3 179 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 SH2D3CQ8N5H7 860 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 MSANTD4Q8NCY6 345 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 RXFP2Q8WXD0 754 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 CAMK1GQ96NX5 476 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 SPAG5Q96R06 1193 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 BPIFA3Q9BQP9 254 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 TMEM121BQ9BXQ6 578 aaPredicted RBP17.89■□□□□ 0.45
SMG6-214ENST00000573827 VPS28Q9UK41 221 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 PPM1HQ9ULR3 514 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 CHD5Q8TDI0 1954 aa17.89■□□□□ 0.45
SMG6-214ENST00000573827 SPAARA0A1B0GVQ0 90 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 TEX33O43247 280 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 SH3BP5O60239 455 aa17.88■□□□□ 0.45
SMG6-214ENST00000573827 RNASEH1O60930 286 aaKnown RBP17.88■□□□□ 0.45
SMG6-214ENST00000573827 ZNF821O75541 412 aaPredicted RBP17.88■□□□□ 0.45
SMG6-214ENST00000573827 RNASEH2AO75792 299 aaKnown RBP17.88■□□□□ 0.45
SMG6-214ENST00000573827 ZMPSTE24O75844 475 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms