RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MMP8P22894 467 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 SDC4P31431 198 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 CSNK1EP49674 416 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 AFF3P51826 1226 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 SEMA3BQ13214 749 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 ELAVL3Q14576 367 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 RXFP2Q8WXD0 754 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 FAM129BQ96TA1 746 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 ZDHHC5Q9C0B5 715 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 NEUROG2Q9H2A3 272 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 DNAAF2Q9NVR5 837 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 MPP6Q9NZW5 540 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 SLCO1B1Q9Y6L6 691 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 ADAMTS9Q9P2N4 1935 aa13.05□□□□□ -0.32
NPLOC4-213ENST00000573519 PCDH15Q96QU1 1955 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 SPAARA0A1B0GVQ0 90 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 A0A1B0GVT2 93 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 LRRC72A6NJI9 287 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 C5AR1P21730 350 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 PMLP29590 882 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 OR1E1P30953 314 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 KRT83P78385 493 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 TEAD4Q15561 434 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 DLG2Q15700 870 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 CLEC16AQ2KHT3 1053 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 C15orf59Q2T9L4 293 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 C5orf22Q49AR2 442 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 NCEH1Q6PIU2 408 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 ADAT2Q7Z6V5 191 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 DSG4Q86SJ6 1040 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 LUZP1Q86V48 1076 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 AADATQ8N5Z0 425 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 ATP11CQ8NB49 1132 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 OR14C36Q8NHC7 312 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 OR8D1Q8WZ84 308 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 ALG14Q96F25 216 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 C1orf74Q96LT6 269 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 NAP1L5Q96NT1 182 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 SELENOOQ9BVL4 669 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 GAREM1Q9H706 876 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 IL21RQ9HBE5 538 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 TMEM51Q9NW97 253 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 TBC1D30Q9Y2I9 924 aa13.04□□□□□ -0.32
NPLOC4-213ENST00000573519 DRGXA6NNA5 263 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 PLK4O00444 970 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 SH3BP5O60239 455 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 SNAP91O60641 907 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 CER1O95813 267 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 C7P10643 843 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 KRT3P12035 628 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 UNGP13051 313 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 CD59P13987 128 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 GOT1P17174 413 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 PTMSP20962 102 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 CD27P26842 260 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 GALCP54803 685 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 HLA-BQ31612 363 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 ZSCAN23Q3MJ62 389 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 POM121L1PQ3SYA9 428 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 CCDC14Q49A88 953 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 RAB6CQ53S08 254 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 C6orf118Q5T5N4 469 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 ACBD5Q5T8D3 534 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 IL27RAQ6UWB1 636 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 LAYNQ6UX15 382 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 Q6ZVU0 165 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 ARCQ7LC44 396 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 SETD3Q86TU7 594 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 ZNF683Q8IZ20 524 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 SH2D3CQ8N5H7 860 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 OR2T34Q8NGX1 318 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 FRS2Q8WU20 508 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 CAMK1GQ96NX5 476 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 HAPLN3Q96S86 360 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 AGPAT1Q99943 283 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 SPON2Q9BUD6 331 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 C2orf49Q9BVC5 232 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 ZYG11BQ9C0D3 744 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 RAB6CQ9H0N0 254 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 FZD4Q9ULV1 537 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 PCDHB9Q9Y5E1 797 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 OR51B4Q9Y5P0 310 aa13.03□□□□□ -0.32
NPLOC4-213ENST00000573519 TBC1D3DA0A087WVF3 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3IA0A087WXS9 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3EA0A087X179 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 TBC1D3KA0A087X1G2 549 aa13.02□□□□□ -0.33
NPLOC4-213ENST00000573519 A0A0D9SEW6 157 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms