RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 GNA12Q03113 381 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 WASHC5Q12768 1159 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 MPPE1Q53F39 396 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 ANKRD20A2Q5SQ80 823 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 MPP7Q5T2T1 576 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 ANKRD20A1Q5TYW2 823 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 ANKRD20A3Q5VUR7 823 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 EMBQ6PCB8 327 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 ZNF783Q6ZMS7 281 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 ARHGAP36Q6ZRI8 547 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 NPAS3Q8IXF0 933 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 GSPT2Q8IYD1 628 aaKnown RBP14.01□□□□□ -0.17
CCDC40-209ENST00000573474 CCDC110Q8TBZ0 833 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 FBXO25Q8TCJ0 367 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 DEPDC1BQ8WUY9 529 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 FATE1Q969F0 183 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 OTUB2Q96DC9 234 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 HMCESQ96FZ2 354 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 SPATA13Q96N96 652 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 VAT1Q99536 393 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 S1PR5Q9H228 398 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 MTRF1LQ9UGC7 380 aaKnown RBP14.01□□□□□ -0.17
CCDC40-209ENST00000573474 IPO11Q9UI26 975 aaKnown RBP14.01□□□□□ -0.17
CCDC40-209ENST00000573474 TRHDEQ9UKU6 1024 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 TBC1D30Q9Y2I9 924 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 DOCK6Q96HP0 2047 aa14.01□□□□□ -0.17
CCDC40-209ENST00000573474 KCNK1O00180 336 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 SMAPO00193 183 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 CYBBP04839 570 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 RHOCP08134 193 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 PTPN3P26045 913 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 FDFT1P37268 417 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 ETFBP38117 255 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 IFI35P80217 286 aaPredicted RBP14□□□□□ -0.17
CCDC40-209ENST00000573474 SERINC3Q13530 473 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 ADGRE1Q14246 886 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 COL19A1Q14993 1142 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 MORF4L2Q15014 288 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 ANO4Q32M45 955 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 TEX44Q53QW1 395 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 BEND6Q5SZJ8 279 aaPredicted RBP14□□□□□ -0.17
CCDC40-209ENST00000573474 RNASEH2BQ5TBB1 312 aaKnown RBP14□□□□□ -0.17
CCDC40-209ENST00000573474 HIBCHQ6NVY1 386 aaPredicted RBP14□□□□□ -0.17
CCDC40-209ENST00000573474 RHBDF2Q6PJF5 856 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 GET4Q7L5D6 327 aaPredicted RBP14□□□□□ -0.17
CCDC40-209ENST00000573474 CCDC117Q8IWD4 279 aaPredicted RBP14□□□□□ -0.17
CCDC40-209ENST00000573474 PPIL6Q8IXY8 311 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 ZNF567Q8N184 647 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 CARNMT1Q8N4J0 409 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 RIN3Q8TB24 985 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 DDI1Q8WTU0 396 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 FGF13Q92913 245 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 SMARCD2Q92925 531 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 ARHGEF2Q92974 986 aaKnown RBP14□□□□□ -0.17
CCDC40-209ENST00000573474 RIPOR3Q96MK2 946 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 FMO2Q99518 471 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 NEUROG2Q9H2A3 272 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 TRPV4Q9HBA0 871 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 CLDND1Q9NY35 253 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 DOCK4Q8N1I0 1966 aa14□□□□□ -0.17
CCDC40-209ENST00000573474 H0Y626 953 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 TP73O15350 636 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 LUC7L3O95232 432 aaKnown RBP13.99□□□□□ -0.17
CCDC40-209ENST00000573474 JCHAINP01591 159 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 FAM153BP0C7A2 387 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 CCNB1P14635 433 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 IGFBP4P22692 258 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 ACVRL1P37023 503 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 MTHFRP42898 656 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 IL10RBQ08334 325 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 PARP6Q2NL67 630 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 FAM153CQ494X1 144 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 FAM78AQ5JUQ0 283 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 RNF43Q68DV7 783 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 EP400NLQ6ZTU2 488 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 PID1Q7Z2X4 250 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 HOOK3Q86VS8 718 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 ZNF354CQ86Y25 554 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 NSMCE1Q8WV22 266 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 CPT1BQ92523 772 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 MAML1Q92585 1016 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 CAVIN3Q969G5 261 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 ASB16Q96NS5 453 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 IL12RB2Q99665 862 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 FOXP3Q9BZS1 431 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 TSPYL1Q9H0U9 437 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 SP110Q9HB58 689 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 RAB6BQ9NRW1 208 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 OBP2AQ9NY56 170 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 KLHL8Q9P2G9 620 aaPredicted RBP13.99□□□□□ -0.17
CCDC40-209ENST00000573474 FAM153AQ9UHL3 310 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 CDH7Q9ULB5 785 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 SHOC2Q9UQ13 582 aa13.99□□□□□ -0.17
CCDC40-209ENST00000573474 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
CCDC40-209ENST00000573474 HELZP42694 1942 aaKnown RBP13.98□□□□□ -0.17
CCDC40-209ENST00000573474 MYO9BQ13459 2157 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 LAMA3Q16787 3333 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 CHADO15335 359 aa13.98□□□□□ -0.17
CCDC40-209ENST00000573474 KDELR3O43731 214 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms