RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KIAA0907Q7Z7F0 614 aaPredicted RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 TAC4Q86UU9 113 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 CCDC117Q8IWD4 279 aaPredicted RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 TMEFF1Q8IYR6 380 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 DEFB106AQ8N104 65 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 ATP6V0D2Q8N8Y2 350 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 ZNF557Q8N988 423 aaPredicted RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 FIBINQ8TAL6 211 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 WFIKKN2Q8TEU8 576 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 PMEPA1Q969W9 287 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 FCRL2Q96LA5 508 aaPredicted RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 MRGPRX1Q96LB2 322 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 LSM14BQ9BX40 385 aaKnown RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 NAA15Q9BXJ9 866 aaKnown RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 RUBCNLQ9H714 662 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 SYNCQ9H7C4 482 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 PLCB1Q9NQ66 1216 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 ITM2CQ9NQX7 267 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 ABCB8Q9NUT2 735 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 ASNSD1Q9NWL6 643 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 TAB2Q9NYJ8 693 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 NOP53Q9NZM5 478 aaKnown RBP7.7□□□□□ -1.18
NUP88-205ENST00000572809 CALCOCO1Q9P1Z2 691 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 GGA2Q9UJY4 613 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 CEP83Q9Y592 693 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 FHOD1Q9Y613 1164 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 CFAP54Q96N23 3096 aa7.7□□□□□ -1.18
NUP88-205ENST00000572809 ABCA7Q8IZY2 2146 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 IGHV1OR15-9A0A0B4J2B8 117 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 A6NHS1 94 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 KCNU1A8MYU2 1149 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 KHNYNO15037 678 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 HSF2BPO75031 334 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 GRAP2O75791 330 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 MBD3O95983 291 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 MOCS2O96007 188 aaPredicted RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 IGLV3-25P01717 112 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 APOEP02649 317 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ERBB2P04626 1255 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ATP5BP06576 529 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 EPHX1P07099 455 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 SLC2A3P11169 496 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 PABPC1P11940 636 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 POLR2EP19388 210 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 CDK11BP21127 795 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 ABCB4P21439 1286 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 CD70P32970 193 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 PTGER3P43115 390 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 LIMK1P53667 647 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 RPS24P62847 133 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 PITX1P78337 314 aaPredicted RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 CTBSQ01459 385 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 RPL6Q02878 288 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 EIF4EBP2Q13542 120 aaPredicted RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 FUT11Q495W5 492 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 FKBP15Q5T1M5 1219 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 RAP1GAP2Q684P5 730 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 MBLAC2Q68D91 279 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 RNF43Q68DV7 783 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 IL31Q6EBC2 164 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 FIGNL1Q6PIW4 674 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 KIAA1324Q6UXG2 1013 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 SERPINA13PQ6UXR4 307 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 FAM183BPQ6ZVS7 135 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ARMCX6Q7L4S7 300 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ADIPOR2Q86V24 386 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ERICH1Q86X53 443 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 TMPRSS6Q8IU80 811 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ZDHHC17Q8IUH5 632 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 SYT12Q8IV01 421 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 MFN1Q8IWA4 741 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 AHI1Q8N157 1196 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 CFAP52Q8N1V2 620 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 CARNMT1Q8N4J0 409 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 DEFB119Q8N690 84 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.69□□□□□ -1.18
NUP88-205ENST00000572809 HJURPQ8NCD3 748 aaPredicted RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 TMEM35BQ8NCS4 154 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 C1orf131Q8NDD1 294 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 ANKRD20A12PQ8NF67 263 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 WFDC5Q8TCV5 224 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 CYB5D2Q8WUJ1 264 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 SORCS1Q8WY21 1168 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 PIGKQ92643 395 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 PRCCQ92733 491 aaPredicted RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 RNF34Q969K3 372 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 C18orf8Q96DM3 657 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 MYEOVQ96EZ4 313 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ABHD17AQ96GS6 310 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 BTN2A3PQ96KV6 586 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 SLC2A13Q96QE2 648 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 KRTAP4-12Q9BQ66 201 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 MKRN2Q9H000 416 aaKnown RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 SLC6A17Q9H1V8 727 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 PRDM16Q9HAZ2 1276 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 RXFP3Q9NSD7 469 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 TMEM74BQ9NUR3 256 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 SUN2Q9UH99 717 aa7.69□□□□□ -1.18
NUP88-205ENST00000572809 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
NUP88-205ENST00000572809 CYP8B1Q9UNU6 501 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms