RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 LEKR1Q6ZMV7 388 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 WDR5BQ86VZ2 330 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 CACUL1Q86Y37 369 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ARHGAP12Q8IWW6 846 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 FAM160A2Q8N612 972 aaPredicted RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 NPWQ8N729 165 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 TSTD1Q8NFU3 115 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 KCNV2Q8TDN2 545 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 FRS2Q8WU20 508 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 HMGB4Q8WW32 186 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 RLN3Q8WXF3 142 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 CTNNBL1Q8WYA6 563 aaPredicted RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 RFFLQ8WZ73 363 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 TSC1Q92574 1164 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 HSPH1Q92598 858 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 PTPRN2Q92932 1015 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 EXOC4Q96A65 974 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ACDQ96AP0 544 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 VOPP1Q96AW1 172 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 TBC1D31Q96DN5 1066 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 EIF3CQ99613 913 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 BAG1Q99933 345 aaPredicted RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 ANP32EQ9BTT0 268 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 PRSS16Q9NQE7 514 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 TMEM248Q9NWD8 314 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 CWC15Q9P013 229 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 IMPACTQ9P2X3 320 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 UVRAGQ9P2Y5 699 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 IP6K2Q9UHH9 426 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 VPS51Q9UID3 782 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 PAXBP1Q9Y5B6 917 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 GPR179Q6PRD1 2367 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 CEP192Q8TEP8 1941 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 CACNA1AO00555 2505 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 SPAG17Q6Q759 2223 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 TNRC6BQ9UPQ9 1833 aaKnown RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 ILVBLA1L0T0 632 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 WASH4PA8MWX3 477 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 MYO1FO00160 1098 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 EEF2KO00418 725 aaKnown RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 AXIN1O15169 862 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 SMAD6O43541 496 aaKnown RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 TIMM44O43615 452 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 PRPSAP2O60256 369 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 BUB1BO60566 1050 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 SIN3BO75182 1162 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 ZNF821O75541 412 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 RNF8O76064 485 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 APBB3O95704 486 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 EPHX1P07099 455 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 SRCP12931 536 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 RHOQP17081 205 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 ERCC2P18074 760 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 AMPD1P23109 780 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 EPHB2P29323 1055 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 OR1E1P30953 314 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 HOXA6P31267 233 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 MARCKSL1P49006 195 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 DGKEP52429 567 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 TPI1P60174 286 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 CCZ1BP86790 482 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 CCZ1P86791 482 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 ECT2LQ008S8 904 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 GNA12Q03113 381 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 MTA1Q13330 715 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 DPYSQ14117 519 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 PIGHQ14442 188 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 ACAP1Q15027 740 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 TCEAL1Q15170 157 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 DPYSL2Q16555 572 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 LPAL2Q16609 132 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 MAP7D1Q3KQU3 841 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 HSF5Q4G112 596 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 PREPLQ4J6C6 727 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 FNDC3BQ53EP0 1204 aaKnown RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 PPP6R3Q5H9R7 873 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 C9orf64Q5T6V5 341 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 SERPINA13PQ6UXR4 307 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 LRRC31Q6UY01 552 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 ARHGAP36Q6ZRI8 547 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 POLNQ7Z5Q5 900 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 SETD3Q86TU7 594 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 LONP2Q86WA8 852 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 TMTC1Q8IUR5 882 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 CCDC170Q8IYT3 715 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 RTL3Q8N8U3 475 aaKnown RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 SUMF1Q8NBK3 374 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 FAM71BQ8TC56 605 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 RAPGEF5Q92565 580 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 ARHGEF2Q92974 986 aaKnown RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 HMCESQ96FZ2 354 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 CELF6Q96J87 481 aaKnown RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 MRGPRX1Q96LB2 322 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 ACE2Q9BYF1 805 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 SLC39A8Q9C0K1 460 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 PCDH18Q9HCL0 1135 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms