RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 KIAA1324Q6UXG2 1013 aaKnown RBP13.75□□□□□ -0.21
CCDC40-205ENST00000571028 TMTC1Q8IUR5 882 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 TERB1Q8NA31 727 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 PIP4K2CQ8TBX8 421 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 CTNNBL1Q8WYA6 563 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-205ENST00000571028 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 OTUB2Q96DC9 234 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 ERLEC1Q96DZ1 483 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 MIR1-1HGQ9H1L0 117 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 PRDM16Q9HAZ2 1276 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 PIGVQ9NUD9 493 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 XPO7Q9UIA9 1087 aaKnown RBP13.75□□□□□ -0.21
CCDC40-205ENST00000571028 SCINQ9Y6U3 715 aa13.75□□□□□ -0.21
CCDC40-205ENST00000571028 HELZ2Q9BYK8 2649 aaKnown RBP13.74□□□□□ -0.21
CCDC40-205ENST00000571028 A0A1B0GTW7 788 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 TRABD2BA6NFA1 517 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 CCP110O43303 1012 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 ACSL4O60488 711 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 CBFA2T3O75081 653 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 TULP3O75386 442 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 F9P00740 461 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 PTMAP06454 111 aaKnown RBP13.74□□□□□ -0.21
CCDC40-205ENST00000571028 CHRM1P11229 460 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-205ENST00000571028 DESP17661 470 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 MAOBP27338 520 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 GGCXP38435 758 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 MAGEA1P43355 309 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 SLC11A2P49281 568 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 OGDHQ02218 1023 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 SPA17Q15506 151 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 OTUD1Q5VV17 481 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-205ENST00000571028 NUGGCQ68CJ6 796 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 RFWD3Q6PCD5 774 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 RAD9BQ6WBX8 426 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 Q6ZNB5 142 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 ZNF605Q86T29 641 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 FAM131BQ86XD5 332 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 TMEM25Q86YD3 366 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 UNC45BQ8IWX7 931 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
CCDC40-205ENST00000571028 ATP6V0D2Q8N8Y2 350 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 RHBDD1Q8TEB9 315 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 FAM172AQ8WUF8 416 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 CRELD1Q96HD1 420 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 ZNF419Q96HQ0 510 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-205ENST00000571028 BTBD6Q96KE9 485 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 NUP85Q9BW27 656 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 SIK2Q9H0K1 926 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 GAREM1Q9H706 876 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 MRPL47Q9HD33 250 aaKnown RBP13.74□□□□□ -0.21
CCDC40-205ENST00000571028 TMPRSS4Q9NRS4 437 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 RRN3Q9NYV6 651 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 PLK2Q9NYY3 685 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 NENFQ9UMX5 172 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 TFR2Q9UP52 801 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 ZNF510Q9Y2H8 683 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 PCDH15Q96QU1 1955 aa13.74□□□□□ -0.21
CCDC40-205ENST00000571028 CELSR3Q9NYQ7 3312 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 A0A1W2PQF6 199 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 TMEM110-MUSTN1A8MSY1 372 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 FLRT2O43155 660 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 IGLV3-25P01717 112 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 CCR1P32246 355 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 PPP1R15BQ5SWA1 713 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 RAP1GAP2Q684P5 730 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 GRAMD4Q6IC98 578 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 CHSY1Q86X52 802 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 CCDC170Q8IYT3 715 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 PHTF2Q8N3S3 785 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 PDCD7Q8N8D1 485 aaKnown RBP13.73□□□□□ -0.21
CCDC40-205ENST00000571028 SLC39A13Q96H72 371 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 BBS2Q9BXC9 721 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 TKTL2Q9H0I9 626 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 SPHK2Q9NRA0 654 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC40-205ENST00000571028 STIM2Q9P246 746 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 PCDHA13Q9Y5I0 950 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 SNX10Q9Y5X0 201 aa13.73□□□□□ -0.21
CCDC40-205ENST00000571028 EPN1Q9Y6I3 576 aaPredicted RBP13.73□□□□□ -0.21
CCDC40-205ENST00000571028 ADAMTS9Q9P2N4 1935 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 TMEM191CA6NGB0 347 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 HOXC11O43248 304 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-205ENST00000571028 NDUFA10O95299 355 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
CCDC40-205ENST00000571028 CYBBP04839 570 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 CYP1A2P05177 515 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 ATXN1LP0C7T5 689 aaKnown RBP13.72□□□□□ -0.21
CCDC40-205ENST00000571028 TMEM253P0C7T8 217 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 ZNF883P0CG24 379 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 SLC2A3P11169 496 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 CD6P30203 668 aa13.72□□□□□ -0.21
CCDC40-205ENST00000571028 SLC6A4P31645 630 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms