RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RUNDC3BQ96NL0 473 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 XPO6Q96QU8 1125 aaKnown RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 UCN2Q96RP3 112 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 PRMT1Q99873 361 aaKnown RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 AP1M1Q9BXS5 423 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 RETREG1Q9H6L5 497 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 SP110Q9HB58 689 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 SPHK2Q9NRA0 654 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 TMEM248Q9NWD8 314 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 TOR4AQ9NXH8 423 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 SMARCAL1Q9NZC9 954 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 VPS28Q9UK41 221 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 TTC7AQ9ULT0 858 aaPredicted RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 HPCAL4Q9UM19 191 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 RAD54BQ9Y620 910 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 CFAP69A5D8W1 941 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 DCLK1O15075 740 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CHADO15335 359 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 GREM1O60565 184 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PHF2O75151 1096 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ECEL1O95672 775 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 GAS8O95995 478 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CYP17A1P05093 508 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 TYRP14679 529 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ARSAP15289 507 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 HOXD9P28356 352 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CHRNA3P32297 505 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 NR2C2P49116 596 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 SGSHP51688 502 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 YBEYP58557 167 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 EIF3EP60228 445 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 OTUD4Q01804 1114 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 LMNB2Q03252 620 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 TFF2Q03403 129 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 C2orf54Q08AI8 447 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 FCHO2Q0JRZ9 810 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 HTR4Q13639 388 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 POLD3Q15054 466 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PAFAH1B3Q15102 231 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 NOMO1Q15155 1222 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 TAZQ16635 292 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 EML3Q32P44 896 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PARP15Q460N3 678 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ALFQ53S48 1182 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 LY6G5CQ5SRR4 150 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 RNF219Q5W0B1 726 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 HEATR6Q6AI08 1181 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 TRIM68Q6AZZ1 485 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 IL31Q6EBC2 164 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 TIGD7Q6NT04 549 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 C8orf74Q6P047 294 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PARM1Q6UWI2 310 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF783Q6ZMS7 281 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 GSTA5Q7RTV2 222 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 C14orf80Q86SX3 495 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 SETD3Q86TU7 594 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZC3H18Q86VM9 953 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CREG2Q8IUH2 290 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC105Q8IYK2 499 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZDHHC14Q8IZN3 488 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PQLC3Q8N755 202 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PLD5Q8N7P1 536 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC89Q8N998 374 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCNYQ8ND76 341 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ST13P5Q8NFI4 369 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PCDH19Q8TAB3 1148 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 RIN3Q8TB24 985 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ACTL9Q8TC94 416 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 TFB1MQ8WVM0 346 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 RSAD2Q8WXG1 361 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ATG4AQ8WYN0 398 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 IRF7Q92985 503 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 IGSF8Q969P0 613 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 NXPE3Q969Y0 559 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 RSPRY1Q96DX4 576 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CELF6Q96J87 481 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZFYVE19Q96K21 471 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 QKIQ96PU8 341 aaKnown RBP eCLIP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 BRD8Q9H0E9 1235 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 EBF3Q9H4W6 596 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ATP13A1Q9HD20 1204 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 DNAJC17Q9NVM6 304 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 PLK2Q9NYY3 685 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 SEPT10Q9P0V9 454 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 IGSF9Q9P2J2 1179 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 NEU3Q9UQ49 428 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 TRIOBPQ9H2D6 2365 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 CHD7Q9P2D1 2997 aa6.75□□□□□ -1.33
CTDNEP1-204ENST00000570484 ILVBLA1L0T0 632 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DRGXA6NNA5 263 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 WASH4PA8MWX3 477 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 HACD1B0YJ81 288 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 RASA4BC9J798 803 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ANHXE9PGG2 379 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 SGK1O00141 431 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 HOXC11O43248 304 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MTSS1O43312 755 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 RASA4O43374 803 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 CACNG3O60359 315 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms