RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TBCBQ99426 244 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MIR1-1HGQ9H1L0 117 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 KDM4CQ9H3R0 1056 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RETREG1Q9H6L5 497 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TM9SF3Q9HD45 589 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SERGEFQ9UGK8 458 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SLC25A13Q9UJS0 675 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 HS3ST2Q9Y278 367 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 USP24Q9UPU5 2620 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FRYQ5TBA9 3013 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CXorf51AA0A1B0GTR3 108 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 A0A1W2PPC4 97 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 LRRC72A6NJI9 287 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 LGALS16A8MUM7 142 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 EPHB6O15197 1021 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CBFA2T3O75081 653 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TRIM16O95361 564 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GOT1P17174 413 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CHRNB2P17787 502 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SLC8A1P32418 973 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GALCP54803 685 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 POLR2FP61218 127 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NRG1Q02297 640 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TEAD4Q15561 434 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TRNP1Q6NT89 227 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ZNF783Q6ZMS7 281 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 APTXQ7Z2E3 356 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GLRX5Q86SX6 157 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MMAAQ8IVH4 418 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 HSD3B7Q9H2F3 369 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ZNF212Q9UDV6 495 aa17.56■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FAM221BA6H8Z2 402 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SLC7A4O43246 635 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GFPT2O94808 682 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 UNGP13051 313 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RDXP35241 583 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 KLK7P49862 253 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RNASE9P60153 205 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RACK1P63244 317 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NCAPHQ15003 741 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 HLA-BQ31612 363 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CCDC183Q5T5S1 534 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NAA35Q5VZE5 725 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 LRRC31Q6UY01 552 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DSG4Q86SJ6 1040 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NAXDQ8IW45 347 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 STK40Q8N2I9 435 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SH2D3CQ8N5H7 860 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 AADATQ8N5Z0 425 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 BAHD1Q8TBE0 780 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SLC20A1Q8WUM9 679 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CPA5Q8WXQ8 436 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 C2orf49Q9BVC5 232 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SIK2Q9H0K1 926 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NEUROG2Q9H2A3 272 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 GAREM1Q9H706 876 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FAM207AQ9NSI2 230 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PPARGC1AQ9UBK2 798 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 VPS28Q9UK41 221 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SLCO1B1Q9Y6L6 691 aa17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 COL5A1P20908 1838 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-208ENST00000570189 A0A1W2PP55 124 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MCF2LO15068 1137 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 LATO43561 262 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DFNA5O60443 496 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RNASEH2AO75792 299 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CNTN5O94779 1100 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DRD3P35462 400 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NUDT1P36639 197 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 STAT1P42224 750 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PTPN9P43378 593 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CSNK1EP49674 416 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CLCN6P51797 869 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ADPRHP54922 357 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 KRT83P78385 493 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PTP4A2Q12974 167 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ZNF423Q2M1K9 1284 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ALFQ53S48 1182 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 C6orf118Q5T5N4 469 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NCEH1Q6PIU2 408 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DCAF4L2Q8NA75 395 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 OR8D1Q8WZ84 308 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SNX19Q92543 992 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PSMB7Q99436 277 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 OMDQ99983 421 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TMEM121BQ9BXQ6 578 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TM7SF3Q9NS93 570 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PPM1HQ9ULR3 514 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ANKRD6Q9Y2G4 727 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 NEUROG3Q9Y4Z2 214 aa17.54■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DOCK9Q9BZ29 2069 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 A0A1B0GVT2 93 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 E9PAM4 449 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 VILLO15195 856 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FLRT2O43155 660 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PCDHGA12O60330 932 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FSBPO95073 299 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CTSKP43235 329 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PSMD8P48556 350 aa17.53■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SIM1P81133 766 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms