RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 GALNT2Q10471 571 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 WHAMMP3Q1A5X7 153 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 IL31Q6EBC2 164 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 ZNF783Q6ZMS7 281 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 ARHGAP36Q6ZRI8 547 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 APCDD1Q8J025 514 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 PRELID2Q8N945 189 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 DNASE1L2Q92874 299 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 LMLNQ96KR4 655 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 OLFM3Q96PB7 478 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 GGA2Q9UJY4 613 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 VPS28Q9UK41 221 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 OR51B4Q9Y5P0 310 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 RAD54BQ9Y620 910 aa12.63□□□□□ -0.39
NUP93-220ENST00000569842 MX2P20592 715 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 EIF3EP60228 445 aaKnown RBP12.62□□□□□ -0.39
NUP93-220ENST00000569842 PFKPQ01813 784 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 MESP2Q0VG99 397 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 SNX1Q13596 522 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 PDK1Q15118 436 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 CCNYQ8ND76 341 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 ALG14Q96F25 216 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 LGMNQ99538 433 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 ATP13A1Q9HD20 1204 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 H7C0C1 242 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 MCF2LO15068 1137 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 NCAM2O15394 837 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 PABPC1P11940 636 aaKnown RBP12.62□□□□□ -0.39
NUP93-220ENST00000569842 GARSP41250 739 aaKnown RBP12.62□□□□□ -0.39
NUP93-220ENST00000569842 ATP5OP48047 213 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 KDSRQ06136 332 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 SERINC3Q13530 473 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 IER5LQ5T953 404 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 ATPAF2Q8N5M1 289 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 C10orf88Q9H8K7 445 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 SLC2A4RGQ9NR83 387 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 INTS6Q9UL03 887 aaKnown RBP12.62□□□□□ -0.39
NUP93-220ENST00000569842 DNPEPQ9ULA0 475 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 DUSP12Q9UNI6 340 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 SORCS3Q9UPU3 1222 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 PIAS3Q9Y6X2 628 aa12.62□□□□□ -0.39
NUP93-220ENST00000569842 GOLGA6L10A0A0M3HER8 536 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 SPECC1L-ADORA2AF8WAN1 911 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 CBX4O00257 560 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 RBP3P10745 1247 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 GLDCP23378 1020 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 ETFBP38117 255 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 CKAP4Q07065 602 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 SLC12A1Q13621 1099 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 CCNG2Q16589 344 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 GEN1Q17RS7 908 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 FUT11Q495W5 492 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 PITRM1Q5JRX3 1037 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 RNF135Q8IUD6 432 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 SLC35B2Q8TB61 432 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 IPO11Q9UI26 975 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 SLC27A6Q9Y2P4 619 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 COL4A3Q01955 1670 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 NUP205Q92621 2012 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 PPP1R12AO14974 1030 aaPredicted RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 LIASO43766 372 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 CTHP32929 405 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.61□□□□□ -0.39
NUP93-220ENST00000569842 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 PNKPQ96T60 521 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 FRMD8P1Q9BZ68 369 aaPredicted RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 RRAGDQ9NQL2 400 aaPredicted RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 HOMER3Q9NSC5 361 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 TICRRQ7Z2Z1 1910 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 J3KR12 359 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 SNAP91O60641 907 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 MAFKO60675 156 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 PLK1P53350 603 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 AP1B1Q10567 949 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 XRCC4Q13426 336 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 BYSLQ13895 437 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 TMEM215Q68D42 235 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 DARS2Q6PI48 645 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 TXNDC11Q6PKC3 985 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 LEKR1Q6ZMV7 388 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 KIAA0907Q7Z7F0 614 aaPredicted RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 ADIPOR2Q86V24 386 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 LRRC49Q8IUZ0 686 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 PHTF2Q8N3S3 785 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 SPATA4Q8NEY3 305 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 TFB1MQ8WVM0 346 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 HDAC11Q96DB2 347 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 C8orf33Q9H7E9 229 aaPredicted RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 FBRSL1Q9HCM7 1045 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 RBM12Q9NTZ6 932 aaKnown RBP12.61□□□□□ -0.39
NUP93-220ENST00000569842 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
NUP93-220ENST00000569842 TCF20Q9UGU0 1960 aaKnown RBP12.6□□□□□ -0.39
NUP93-220ENST00000569842 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.6□□□□□ -0.39
NUP93-220ENST00000569842 KDELR3O43731 214 aa12.6□□□□□ -0.39
NUP93-220ENST00000569842 GALK1P51570 392 aa12.6□□□□□ -0.39
NUP93-220ENST00000569842 PPIDQ08752 370 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms