RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 TEX44Q53QW1 395 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 CEP128Q6ZU80 1094 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 TTC16Q8NEE8 873 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 PYROXD1Q8WU10 500 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 TSGA13Q96PP4 275 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 PHACTR1Q9C0D0 580 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 CERS4Q9HA82 394 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 AGO1Q9UL18 857 aaKnown RBP11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 YBX2Q9Y2T7 364 aaKnown RBP11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 TEX264Q9Y6I9 313 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 FOXO6A8MYZ6 492 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 C5orf67F2Z3F1 127 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 PBX2P40425 430 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 CCR2P41597 374 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 MAGEA3P43357 314 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 EFTUD2Q15029 972 aaKnown RBP eCLIP11.19□□□□□ -0.627e-7■■■■□ 23
PDXDC1-216ENST00000569715 PARP6Q2NL67 630 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 CCDC149Q6ZUS6 474 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 OTOP3Q7RTS5 596 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 OR52K2Q8NGK3 314 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 CORO1BQ9BR76 489 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 MLPHQ9BV36 600 aaPredicted RBP11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 GBA3Q9H227 469 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 RSPH14Q9UHP6 348 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 ZFP37Q9Y6Q3 630 aaPredicted RBP11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 NOTCH4Q99466 2003 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 C5orf42Q9H799 3197 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 A0A1W2PRU2 124 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 RASA4BC9J798 803 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 J3KR12 359 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 RASGRF2O14827 1237 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 RASA4O43374 803 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 ABHD2P08910 425 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 CCNB1P14635 433 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 EPCAMP16422 314 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 CCNCP24863 283 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 PPP3CCP48454 512 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 LMAN1P49257 510 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 SMAD3P84022 425 aaKnown RBP11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 MCUQ8NE86 351 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 TEKT5Q96M29 485 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 TTC25Q96NG3 672 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 TMEM109Q9BVC6 243 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 PLAC1Q9HBJ0 212 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 MAN1C1Q9NR34 630 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 UBP1Q9NZI7 540 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 NOVA2Q9UNW9 492 aaKnown RBP11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 TTLL3Q9Y4R7 772 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 ASB3Q9Y575 518 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 PER2O15055 1255 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 EIF3HO15372 352 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 TSPAN3O60637 253 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 USP12O75317 370 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 OLFM2O95897 454 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 MYL4P12829 197 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 SLC11A2P49281 568 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 PPP1R21Q6ZMI0 780 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 IPO11Q9UI26 975 aaKnown RBP11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 RWDD3Q9Y3V2 267 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 CPQQ9Y646 472 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 GREM1O60565 184 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 PEX11BO96011 259 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 HDCP19113 662 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 GCAP28676 217 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 OR1E1P30953 314 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 ACVRL1P37023 503 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 CRADDP78560 199 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 CCDC38Q502W7 563 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 LEKR1Q6ZMV7 388 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 OXNAD1Q96HP4 312 aaPredicted RBP11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
PDXDC1-216ENST00000569715 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 A0A087WUV0 522 aaPredicted RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 ARHGAP42A6NI28 874 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 HMGB1P1B2RPK0 211 aaPredicted RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 H3BNC9 293 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 MATN3O15232 486 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 MTSS1O43312 755 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 HLA-DQB2P05538 268 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 NDST2P52849 883 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 C5orf22Q49AR2 442 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 PPM1LQ5SGD2 360 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 ATP11CQ8NB49 1132 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 CFAP36Q96G28 342 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 IL12RB2Q99665 862 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 SMG9Q9H0W8 520 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 ATXN3LQ9H3M9 355 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 HPDP32754 393 aaPredicted RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 MAGOHP61326 146 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 PABPC1LQ4VXU2 614 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 AGBL2Q5U5Z8 902 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 SPATA22Q8NHS9 363 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 FAM76AQ8TAV0 307 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 TLCD1Q96CP7 247 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 MRRFQ96E11 262 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 TCEAL4Q96EI5 215 aa11.17□□□□□ -0.62
PDXDC1-216ENST00000569715 SIGLEC10Q96LC7 697 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms