RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 GRIA2P42262 883 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 SOX9P48436 509 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 SEMA3BQ13214 749 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 POLD3Q15054 466 aaPredicted RBP16.45■□□□□ 0.22
USB1-215ENST00000569252 ALFQ53S48 1182 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 TFDP3Q5H9I0 405 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 SEL1L2Q5TEA6 688 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 MANEALQ5VSG8 457 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 KAZNQ674X7 775 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
USB1-215ENST00000569252 ZNF783Q6ZMS7 281 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 BZW1Q7L1Q6 419 aaKnown RBP16.45■□□□□ 0.22
USB1-215ENST00000569252 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 RTL3Q8N8U3 475 aaKnown RBP16.45■□□□□ 0.22
USB1-215ENST00000569252 FAM71BQ8TC56 605 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 UCMAQ8WVF2 138 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 SEMA4AQ9H3S1 761 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 PARD6AQ9NPB6 346 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 F5P12259 2224 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 ILVBLA1L0T0 632 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 DCDC2BA2VCK2 349 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 WASH4PA8MWX3 477 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 KCNK3O14649 394 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 NCAM2O15394 837 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 RAMP2O60895 175 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 ATP5BP06576 529 aaKnown RBP16.44■□□□□ 0.22
USB1-215ENST00000569252 CD48P09326 243 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 POLR2EP19388 210 aaKnown RBP16.44■□□□□ 0.22
USB1-215ENST00000569252 AMPD1P23109 780 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 DEKP35659 375 aaKnown RBP16.44■□□□□ 0.22
USB1-215ENST00000569252 PEX5P50542 639 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 ARSEP51690 589 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 KDSRQ06136 332 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 MMRN1Q13201 1228 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 DMC1Q14565 340 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 RNF219Q5W0B1 726 aaPredicted RBP16.44■□□□□ 0.22
USB1-215ENST00000569252 IL31Q6EBC2 164 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 SPOCD1Q6ZMY3 1216 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 AHI1Q8N157 1196 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 WFIKKN2Q8TEU8 576 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 MYEOVQ96EZ4 313 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 RNF157Q96PX1 679 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 SPON2Q9BUD6 331 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 ABCB8Q9NUT2 735 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 GGA2Q9UJY4 613 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 FBXO10Q9UK96 956 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 PLA2G4CQ9UP65 541 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 TBC1D30Q9Y2I9 924 aa16.44■□□□□ 0.22
USB1-215ENST00000569252 CTAGE9A4FU28 777 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 ARHGAP42A6NI28 874 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 APOL1O14791 398 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 TJP3O95049 919 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 KAT7O95251 611 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 TUBB4AP04350 444 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 PABPC1P11940 636 aaKnown RBP16.43■□□□□ 0.22
USB1-215ENST00000569252 IL4RP24394 825 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 TNFRSF4P43489 277 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 NDST2P52849 883 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 YBEYP58557 167 aaPredicted RBP16.43■□□□□ 0.22
USB1-215ENST00000569252 SULT2A1Q06520 285 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 DPYSQ14117 519 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 PON2Q15165 354 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 MFSD7Q6UXD7 560 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 NLRP14Q86W24 1093 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 ETFBKMTQ8IXQ9 262 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 C17orf53Q8N3J3 647 aaPredicted RBP16.43■□□□□ 0.22
USB1-215ENST00000569252 TSC1Q92574 1164 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 CHFRQ96EP1 664 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 MAGEH1Q9H213 219 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 VPS28Q9UK41 221 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 NDRG2Q9UN36 371 aaKnown RBP16.43■□□□□ 0.22
USB1-215ENST00000569252 SMG5Q9UPR3 1016 aaKnown RBP16.43■□□□□ 0.22
USB1-215ENST00000569252 SLC27A6Q9Y2P4 619 aa16.43■□□□□ 0.22
USB1-215ENST00000569252 ENC1O14682 589 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 DDX3YO15523 660 aaKnown RBP16.42■□□□□ 0.22
USB1-215ENST00000569252 CISD3P0C7P0 127 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 PYGMP11217 842 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 CASQ1P31415 396 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 NNMTP40261 264 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 OPRD1P41143 372 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 CDKN2BP42772 138 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 MARCKSL1P49006 195 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 IRAK1P51617 712 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 GNA12Q03113 381 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 LMAN2Q12907 356 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 MTAPQ13126 283 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 FZD5Q13467 585 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 LRRC32Q14392 662 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 PPP2R5EQ16537 467 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 PARP15Q460N3 678 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 FSCBQ5H9T9 825 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 SDE2Q6IQ49 451 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 C12orf40Q86WS4 652 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 PBKQ96KB5 322 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 FEM1AQ9BSK4 669 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 C2orf49Q9BVC5 232 aaPredicted RBP16.42■□□□□ 0.22
USB1-215ENST00000569252 OSBPL8Q9BZF1 889 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 CIPCQ9C0C6 399 aa16.42■□□□□ 0.22
USB1-215ENST00000569252 EFR3BQ9Y2G0 817 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms