RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TP53INP2Q8IXH6 220 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 SYNPOQ8N3V7 929 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 NETO2Q8NC67 525 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 EXD1Q8NHP7 514 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 USP33Q8TEY7 942 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 ARHGEF2Q92974 986 aaKnown RBP18.45■□□□□ 0.54
COMMD4-222ENST00000568034 PBXIP1Q96AQ6 731 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 MYO19Q96H55 970 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 RNF157Q96PX1 679 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 ACE2Q9BYF1 805 aaPredicted RBP18.45■□□□□ 0.54
COMMD4-222ENST00000568034 CHRDQ9H2X0 955 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 ZDHHC4Q9NPG8 344 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 KCND1Q9NSA2 647 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 MIF4GDA9UHW6 222 aaKnown RBP18.44■□□□□ 0.54
COMMD4-222ENST00000568034 STK25O00506 426 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 DAPK3O43293 454 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 SNAP91O60641 907 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 RAMP2O60895 175 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 ZMPSTE24O75844 475 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 GLDCP23378 1020 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 RPS9P46781 194 aaKnown RBP18.44■□□□□ 0.54
COMMD4-222ENST00000568034 CLCN5P51795 746 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 ZFYVE27Q5T4F4 411 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 MEI1Q5TIA1 1274 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 DCAF12L1Q5VU92 463 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 SPOCD1Q6ZMY3 1216 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 FBXL6Q8N531 539 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 TMEM105Q8N8V8 129 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 DCAF4L2Q8NA75 395 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 TRIM58Q8NG06 486 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 CYB5D2Q8WUJ1 264 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 HMCESQ96FZ2 354 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 CELF6Q96J87 481 aaKnown RBP18.44■□□□□ 0.54
COMMD4-222ENST00000568034 MRGPRX3Q96LB0 322 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 ALS2CR12Q96Q35 445 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 ACOX2Q99424 681 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 HERPUD2Q9BSE4 406 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 CIPCQ9C0C6 399 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 MUC3BQ9H195 1237 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 THAP10Q9P2Z0 257 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-222ENST00000568034 NUP205Q92621 2012 aa18.44■□□□□ 0.54
COMMD4-222ENST00000568034 RASA4BC9J798 803 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 RASA4O43374 803 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 GPR37L1O60883 481 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 HNRNPLP14866 589 aaKnown RBP eCLIP18.43■□□□□ 0.54
COMMD4-222ENST00000568034 TIE1P35590 1138 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 NDST2P52849 883 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 RWDD2BP57060 319 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 YBEYP58557 167 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-222ENST00000568034 MRPS21P82921 87 aaKnown RBP18.43■□□□□ 0.54
COMMD4-222ENST00000568034 ENPP2Q13822 863 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 SLC9A4Q6AI14 798 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 RCOR2Q8IZ40 523 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-222ENST00000568034 PLD5Q8N7P1 536 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 IL17RCQ8NAC3 791 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 RPLP0P6Q8NHW5 317 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 SLC39A8Q9C0K1 460 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 MAGEH1Q9H213 219 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 C2orf42Q9NWW7 574 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 VPS51Q9UID3 782 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 VPS28Q9UK41 221 aa18.43■□□□□ 0.54
COMMD4-222ENST00000568034 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
COMMD4-222ENST00000568034 NYNRINQ9P2P1 1898 aaKnown RBP18.43■□□□□ 0.54
COMMD4-222ENST00000568034 hCG_1818297A0A087WSY0 165 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 CHURC1-FNTBB4DL54 471 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 NCAM2O15394 837 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 TIMM44O43615 452 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 MFSD11O43934 449 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 ADAM23O75077 832 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 ZRANB2O95218 330 aaKnown RBP eCLIP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 DLDP09622 509 aaKnown RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 POLR2EP19388 210 aaKnown RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 ARF5P84085 180 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 ADCY2Q08462 1091 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 ZNF234Q14588 700 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 POLD3Q15054 466 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 PAFAH1B3Q15102 231 aaKnown RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 PPP2R5EQ16537 467 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 PARP15Q460N3 678 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 C2orf27AQ580R0 203 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 AADACL2Q6P093 401 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 TMCO3Q6UWJ1 677 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 NUDT18Q6ZVK8 323 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 ZNF513Q8N8E2 541 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 KCNV2Q8TDN2 545 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 RBM41Q96IZ5 413 aaKnown RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 TLR10Q9BXR5 811 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 ATP13A1Q9HD20 1204 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 POLR3BQ9NW08 1133 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 DONSONQ9NYP3 566 aa18.42■□□□□ 0.54
COMMD4-222ENST00000568034 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.42■□□□□ 0.54
COMMD4-222ENST00000568034 KMT2EQ8IZD2 1858 aa18.41■□□□□ 0.54
COMMD4-222ENST00000568034 GOLGA6L9A6NEM1 432 aa18.41■□□□□ 0.54
COMMD4-222ENST00000568034 CD160O95971 181 aa18.41■□□□□ 0.54
COMMD4-222ENST00000568034 ASLP04424 464 aa18.41■□□□□ 0.54
COMMD4-222ENST00000568034 PYGMP11217 842 aa18.41■□□□□ 0.54
COMMD4-222ENST00000568034 KRT10P13645 584 aa18.41■□□□□ 0.54
COMMD4-222ENST00000568034 PTPN7P35236 360 aa18.41■□□□□ 0.54
COMMD4-222ENST00000568034 ETFBP38117 255 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms