RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DNAAF2Q9NVR5 837 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 ARHGEF38Q9NXL2 777 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 LIMA1Q9UHB6 759 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 NOCTQ9UK39 431 aaKnown RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 ANGPTL2Q9UKU9 493 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 VANGL2Q9ULK5 521 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 NCKAP1Q9Y2A7 1128 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 TBC1D30Q9Y2I9 924 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 SIK3Q9Y2K2 1263 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.93□□□□□ -1.62
CLK3-219ENST00000567805 HS3ST4Q9Y661 456 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 ZFHX4Q86UP3 3567 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 PCNX2A6NKB5 2137 aa4.93□□□□□ -1.62
CLK3-219ENST00000567805 IGLV3-10A0A075B6K4 115 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 LRRC72A6NJI9 287 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 TTC34A8MYJ7 566 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 GOLGA8SH3BPF8 625 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 GIPC1O14908 333 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 EPHB6O15197 1021 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 MID1O15344 667 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 GJB3O75712 270 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 RNASEH2AO75792 299 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 CER1O95813 267 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 CYP1A1P04798 512 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 ZNF883P0CG24 379 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 UNGP13051 313 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 ZNF18P17022 549 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 TFE3P19532 575 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 CDK11BP21127 795 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 C5AR1P21730 350 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 MMP8P22894 467 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 CD27P26842 260 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 MZF1P28698 734 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 RDXP35241 583 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 FLT3P36888 993 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 STAT1P42224 750 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 STK19P49842 368 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 AFF3P51826 1226 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 GSCP56915 257 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 KRT83P78385 493 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 FMO1Q01740 532 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 UBXN1Q04323 297 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 TYRO3Q06418 890 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 ZNF252P-AS1Q0IIN9 211 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 GRIK2Q13002 908 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 HNRNPDQ14103 355 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 ELAVL3Q14576 367 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 NCAPHQ15003 741 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 LAPTM4AQ15012 233 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 SYCP1Q15431 976 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 TEAD4Q15561 434 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 C2CD6Q53TS8 623 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 IL27RAQ6UWB1 636 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 LRRC31Q6UY01 552 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 APTXQ7Z2E3 356 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 BNIPLQ7Z465 357 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 C14orf80Q86SX3 495 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 SETD3Q86TU7 594 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 MMAAQ8IVH4 418 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 ZNF683Q8IZ20 524 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 DEFB124Q8NES8 71 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 NEK11Q8NG66 645 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 FRS2Q8WU20 508 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 SLC20A1Q8WUM9 679 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 SNX19Q92543 992 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 PTPRN2Q92932 1015 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 BIRC7Q96CA5 298 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 ALG14Q96F25 216 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 RPL10LQ96L21 214 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 C1orf74Q96LT6 269 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 PCMTD1Q96MG8 357 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 CNTNAP3BQ96NU0 1288 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 ERGIC2Q96RQ1 377 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 HAPLN3Q96S86 360 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 FAM129BQ96TA1 746 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 TBCBQ99426 244 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 OMDQ99983 421 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 BPIFA3Q9BQP9 254 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 C2orf49Q9BVC5 232 aaPredicted RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 CNTNAP3Q9BZ76 1288 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 SIK2Q9H0K1 926 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 MUC3BQ9H195 1237 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 MIR1-1HGQ9H1L0 117 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 MTG2Q9H4K7 406 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 OSGEPQ9NPF4 335 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 NLRC4Q9NPP4 1024 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 METTL5Q9NRN9 209 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 FBXL12Q9NXK8 326 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 ADAMTS1Q9UHI8 967 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 SLCO3A1Q9UIG8 710 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 SLC25A13Q9UJS0 675 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 TMEM59LQ9UK28 342 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 VPS28Q9UK41 221 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 FZD4Q9ULV1 537 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 TPX2Q9ULW0 747 aaKnown RBP4.92□□□□□ -1.62
CLK3-219ENST00000567805 OR51B4Q9Y5P0 310 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 LAMA5O15230 3695 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 PTPRBP23467 1997 aa4.92□□□□□ -1.62
CLK3-219ENST00000567805 DOCK9Q9BZ29 2069 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms