RNA–Protein interactions for RNA: ENST00000567118.5

PKM-219, Transcript of pyruvate kinase M1/2, human

TSL 2

Gene PKM, Length 2,254 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-219	ENST00000567118	RFWD3	Q6PCD5	774 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	BNIPL	Q7Z465	357 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	TDRP	Q86YL5	185 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	UNC45B	Q8IWX7	931 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	CFAP52	Q8N1V2	620 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	CCHCR1	Q8TD31	782 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	DENND1A	Q8TEH3	1009 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	C2orf15	Q8WU43	125 aa	Known RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	PRCC	Q92733	491 aa	Predicted RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	MYEOV	Q96EZ4	313 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	SMOC2	Q9H3U7	446 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	ARHGEF4	Q9NR80	690 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118		A8MUI8	341 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	HGS	O14964	777 aa	Predicted RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	SPAG7	O75391	227 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	RPSA	P08865	295 aa	Known RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	RBP3	P10745	1247 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	CCNB1	P14635	433 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	TPI1	P60174	286 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	DARS2	Q6PI48	645 aa	Known RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	CEP128	Q6ZU80	1094 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	RFX8	Q6ZV50	586 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	FAM47E	Q6ZV65	393 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	TMEM150A	Q86TG1	271 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	ALLC	Q8N6M5	410 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.63	□□□□□ -0.55
PKM-219	ENST00000567118	CCNY	Q8ND76	341 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	TCEAL4	Q96EI5	215 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	MAN1C1	Q9NR34	630 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	SEPT10	Q9P0V9	454 aa		11.63	□□□□□ -0.55
PKM-219	ENST00000567118	PRPF4	O43172	522 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	5e-7	■■□□□ 11.4
PKM-219	ENST00000567118	MFSD11	O43934	449 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	ANP32D	O95626	131 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	CSH1	P0DML2	217 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	CSH2	P0DML3	217 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	ERCC2	P18074	760 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	SKIV2L2	P42285	1042 aa	Known RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	MSH2	P43246	934 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	CLCN4	P51793	760 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	VCP	P55072	806 aa	Known RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	ZXDB	P98169	803 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	CCDC15	Q0P6D6	951 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	NR1H3	Q13133	447 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	CBX2	Q14781	532 aa	Predicted RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	PDK2	Q15119	407 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	RAP1GAP2	Q684P5	730 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	BBS12	Q6ZW61	710 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	GAREM2	Q75VX8	874 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	DENND1C	Q8IV53	801 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	TCEAL8	Q8IYN2	117 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	NPW	Q8N729	165 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	TEKT4	Q8WW24	435 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	SPOCK2	Q92563	424 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	NUP205	Q92621	2012 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	RSRC1	Q96IZ7	334 aa	Known RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	TTC25	Q96NG3	672 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	SH3GL3	Q99963	347 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	PAIP2	Q9BPZ3	127 aa	Known RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	EMILIN2	Q9BXX0	1053 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	ATXN3L	Q9H3M9	355 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	KIF9	Q9HAQ2	790 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	SLC28A3	Q9HAS3	691 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	IL37	Q9NZH6	218 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	TRPM5	Q9NZQ8	1165 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	GRID1	Q9ULK0	1009 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	HS3ST4	Q9Y661	456 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	FAM92A	A1XBS5	289 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	POC1B-GALNT4	F8VUJ3	575 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	GOLGA8M	H3BSY2	632 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	LPXN	O60711	386 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	UNC5C	O95185	931 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	F9	P00740	461 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	IGLV3-25	P01717	112 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	PTPN7	P35236	360 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	ATP5C1	P36542	298 aa	Known RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	CCR2	P41597	374 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	GPS1	Q13098	491 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	DNAJC3	Q13217	504 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	OASL	Q15646	514 aa	Known RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	FAXC	Q5TGI0	409 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	PIK3R6	Q5UE93	754 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	NCBP2-AS2	Q69YL0	99 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	ING5	Q8WYH8	240 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	PSMG2	Q969U7	264 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	SERPINB11	Q96P15	392 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	DTL	Q9NZJ0	730 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	FNIP2	Q9P278	1114 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	DRG1	Q9Y295	367 aa	Known RBP	11.62	□□□□□ -0.55
PKM-219	ENST00000567118	STK38L	Q9Y2H1	464 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	STARD13	Q9Y3M8	1113 aa		11.62	□□□□□ -0.55
PKM-219	ENST00000567118	EME2	A4GXA9	379 aa	Predicted RBP	11.61	□□□□□ -0.55
PKM-219	ENST00000567118	ANKRD33B	A6NCL7	494 aa		11.61	□□□□□ -0.55
PKM-219	ENST00000567118	APOC4-APOC2	K7ER74	178 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms