RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 B3GNT5Q9BYG0 378 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 TNMDQ9H2S6 317 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 PREBQ9HCU5 417 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CLEC4EQ9ULY5 219 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 LOXL2Q9Y4K0 774 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 CSNK1G3Q9Y6M4 447 aa10.06□□□□□ -0.8
CAPN3-216ENST00000567071 A8MXQ7 604 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 MDM4O15151 490 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 DIAPH2O60879 1101 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 AP1G2O75843 785 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 PRPF6O94906 941 aaKnown RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 TNNC2P02585 160 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 SLFN14P0C7P3 912 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 RARGP13631 454 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 CASP1P29466 404 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 HLA-FP30511 346 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 NOS2P35228 1153 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 MAPK10P53779 464 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 HNRNPA1L2Q32P51 320 aaKnown RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 HYIQ5T013 277 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 CRELD2Q6UXH1 353 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 FAM35AQ86V20 835 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 TRIM69Q86WT6 500 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 BRSK2Q8IWQ3 736 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 ZNF548Q8NEK5 533 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 NANOS1Q8WY41 292 aaKnown RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 RAD54LQ92698 747 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 ERCC4Q92889 916 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 TIGD1Q96MW7 591 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 FAM213AQ9BRX8 229 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 PARVGQ9HBI0 331 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 BLOC1S4Q9NUP1 217 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 RBAKQ9NYW8 714 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-216ENST00000567071 ARHGAP20Q9P2F6 1191 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 USP25Q9UHP3 1055 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 SIX4Q9UIU6 781 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 TP53TG5Q9Y2B4 290 aa10.05□□□□□ -0.8
CAPN3-216ENST00000567071 TARSL2A2RTX5 802 aaKnown RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 C10orf142B7Z368 130 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 SLC7A4O43246 635 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 SLC26A4O43511 780 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 TACC1O75410 805 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 LDHAP00338 332 aaKnown RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 IL1BP01584 269 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 KLKB1P03952 638 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 HMBSP08397 361 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 FAM163BP0C2L3 166 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 RALAP11233 206 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 AKT2P31751 481 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 CCKBRP32239 447 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 ZNF445P59923 1031 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 TNNC1P63316 161 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 PNOCQ13519 176 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 MCM6Q14566 821 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 B3GNT8Q7Z7M8 397 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 ADIPOR2Q86V24 386 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 DENND1CQ8IV53 801 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 AADATQ8N5Z0 425 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 ZNF557Q8N988 423 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 SYT2Q8N9I0 419 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 JPH3Q8WXH2 748 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 LARP4BQ92615 738 aaKnown RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 USP7Q93009 1102 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 PAGE5Q96GU1 130 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 CMKLR1Q99788 373 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 EPAS1Q99814 870 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 MYOCQ99972 504 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 SLC29A3Q9BZD2 475 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 FOXP3Q9BZS1 431 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 BLZF1Q9H2G9 400 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 ZHX3Q9H4I2 956 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 MTG2Q9H4K7 406 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 AKAP7Q9P0M2 348 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 STK17AQ9UEE5 414 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 GGT7Q9UJ14 662 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 RASAL2Q9UJF2 1139 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 NUDT5Q9UKK9 219 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 ITGB1BP2Q9UKP3 347 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 AGO1Q9UL18 857 aaKnown RBP10.04□□□□□ -0.8
CAPN3-216ENST00000567071 STRIP2Q9ULQ0 834 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 CA5BQ9Y2D0 317 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 STYXL1Q9Y6J8 313 aa10.04□□□□□ -0.8
CAPN3-216ENST00000567071 DNHD1Q96M86 4753 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 NPHP3-ACAD11A0A0J9YXS1 232 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 EDDM13A0A1B0GTR0 161 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 ARHGAP10A1A4S6 786 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 SYCE3A1L190 88 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 TISP43B9A030 160 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 D6RAR5 112 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 MKRN2OSH3BPM6 223 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 NTN3O00634 580 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 TPP1O14773 563 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms