RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 NDRG2Q9UN36 371 aaKnown RBP11.78□□□□□ -0.52
KARS-207ENST00000566560 TBC1D30Q9Y2I9 924 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 SLC27A6Q9Y2P4 619 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 MRPS17Q9Y2R5 130 aaKnown RBP11.78□□□□□ -0.52
KARS-207ENST00000566560 PCDHA3Q9Y5H8 950 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 VCANP13611 3396 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 NYNRINQ9P2P1 1898 aaKnown RBP11.78□□□□□ -0.52
KARS-207ENST00000566560 SHISA7A6NL88 538 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 C3orf70A6NLC5 250 aaPredicted RBP11.77□□□□□ -0.53
KARS-207ENST00000566560 WASH4PA8MWX3 477 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 ZNF487B1APH4 448 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 DCLK1O15075 740 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 DDX3YO15523 660 aaKnown RBP11.77□□□□□ -0.53
KARS-207ENST00000566560 RAMP2O60895 175 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 CISD3P0C7P0 127 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 AMPD1P23109 780 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 TARSP26639 723 aaKnown RBP11.77□□□□□ -0.53
KARS-207ENST00000566560 SERPINB6P35237 376 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 GRIA2P42262 883 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 GALK1P51570 392 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 STARD6P59095 220 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 UBXN2BQ14CS0 331 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 RPS6KA1Q15418 735 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 GEN1Q17RS7 908 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 FUT11Q495W5 492 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 ANKRD20A8PQ5CZ79 823 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 FSCBQ5H9T9 825 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 MEI1Q5TIA1 1274 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 RNF219Q5W0B1 726 aaPredicted RBP11.77□□□□□ -0.53
KARS-207ENST00000566560 FSTL4Q6MZW2 842 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 BLOC1S3Q6QNY0 202 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 TMCO3Q6UWJ1 677 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 MFSD7Q6UXD7 560 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 SPOCD1Q6ZMY3 1216 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 TRIM67Q6ZTA4 783 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 SLC35F6Q8N357 371 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 NPWQ8N729 165 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 OR52K2Q8NGK3 314 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 FOXQ1Q9C009 403 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 MFSD1Q9H3U5 465 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 LTB4R2Q9NPC1 389 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 NDFIP2Q9NV92 336 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 VPS28Q9UK41 221 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 FBXO10Q9UK96 956 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 MFHAS1Q9Y4C4 1052 aa11.77□□□□□ -0.53
KARS-207ENST00000566560 NUP205Q92621 2012 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 ATG2BQ96BY7 2078 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 A0A0D9SEW6 157 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 KANSL1LA0AUZ9 987 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 ILVBLA1L0T0 632 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 TBC1D3BA6NDS4 549 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 APOL1O14791 398 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 MFSD11O43934 449 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 ZRANB2O95218 330 aaKnown RBP eCLIP11.76□□□□□ -0.53
KARS-207ENST00000566560 EGFP01133 1207 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 DRD1P21728 446 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 IL4RP24394 825 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 MZF1P28698 734 aaPredicted RBP11.76□□□□□ -0.53
KARS-207ENST00000566560 ETFBP38117 255 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 CDKN2BP42772 138 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 NUMBP49757 651 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 PEX5P50542 639 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 GNG11P61952 73 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 DYNLT1P63172 113 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 GNA12Q03113 381 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 SLC12A1Q13621 1099 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 LRRC32Q14392 662 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 DMC1Q14565 340 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 EIF4HQ15056 248 aaKnown RBP11.76□□□□□ -0.53
KARS-207ENST00000566560 PPP2R5EQ16537 467 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 PLEKHG6Q3KR16 790 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 TFDP3Q5H9I0 405 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 PITRM1Q5JRX3 1037 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 DCAF12L1Q5VU92 463 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 NCBP2-AS2Q69YL0 99 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 ZNF783Q6ZMS7 281 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 RFX6Q8HWS3 928 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 SFTPA1Q8IWL2 248 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 RCOR2Q8IZ40 523 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 DCAF4L2Q8NA75 395 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 FLCNQ8NFG4 579 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 OR7D4Q8NG98 312 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 PCDH19Q8TAB3 1148 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 UBE2Q2Q8WVN8 375 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 CELF6Q96J87 481 aaKnown RBP11.76□□□□□ -0.53
KARS-207ENST00000566560 LMLNQ96KR4 655 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 RNF157Q96PX1 679 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 COL25A1Q9BXS0 654 aaPredicted RBP11.76□□□□□ -0.53
KARS-207ENST00000566560 CIPCQ9C0C6 399 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 FBRSL1Q9HCM7 1045 aaKnown RBP11.76□□□□□ -0.53
KARS-207ENST00000566560 ETNK2Q9NVF9 386 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 JRKLQ9Y4A0 524 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 SHROOM3Q8TF72 1996 aa11.76□□□□□ -0.53
KARS-207ENST00000566560 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
KARS-207ENST00000566560 CUL9Q8IWT3 2517 aa11.75□□□□□ -0.53
KARS-207ENST00000566560 hCG_1818297A0A087WSY0 165 aa11.75□□□□□ -0.53
KARS-207ENST00000566560 TMEM221A6NGB7 291 aa11.75□□□□□ -0.53
KARS-207ENST00000566560 RASA4BC9J798 803 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms