RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ZNF605Q86T29 641 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 ERICH1Q86X53 443 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 CREBRFQ8IUR6 639 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 DCBLD1Q8N8Z6 715 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 MFSD2AQ8NA29 543 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 EHBP1Q8NDI1 1231 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 ENOX1Q8TC92 643 aaKnown RBP13.83□□□□□ -0.2
COMMD4-214ENST00000566230 SLC39A13Q96H72 371 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 RPL10LQ96L21 214 aaKnown RBP13.83□□□□□ -0.2
COMMD4-214ENST00000566230 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3DA0A087WVF3 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3IA0A087WXS9 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3EA0A087X179 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3KA0A087X1G2 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TEX51A0A1B0GUA7 166 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3FA6NER0 549 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3LB9A6J9 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 RNF225M0QZC1 329 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TRIM38O00635 465 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 LUC7L3O95232 432 aaKnown RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 ADH1BP00325 375 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3HP0C7X1 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 ACP1P24666 158 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 MZF1P28698 734 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 STK19P49842 368 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 YWHAEP62258 255 aaKnown RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 LRMPQ12912 555 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 CDH18Q13634 790 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 SLC45A4Q5BKX6 768 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3GQ6DHY5 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3CQ6IPX1 549 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 NAPEPLDQ6IQ20 393 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 IRF2BP1Q8IU81 584 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 SPACA3Q8IXA5 215 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D3Q8IZP1 549 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 OXR1Q8N573 874 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 FAM131CQ96AQ9 280 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 DDX50Q9BQ39 737 aaKnown RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 XPO7Q9UIA9 1087 aaKnown RBP13.82□□□□□ -0.2
COMMD4-214ENST00000566230 CLCA2Q9UQC9 943 aa13.82□□□□□ -0.2
COMMD4-214ENST00000566230 SIGLEC6O43699 453 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 SDC3O75056 442 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 RTN2O75298 545 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 CALCAP01258 141 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 TBXAS1P24557 533 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-214ENST00000566230 ACTN2P35609 894 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 CNGA2Q16280 664 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 KLHL40Q2TBA0 621 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 SKOR2Q2VWA4 1001 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-214ENST00000566230 TBC1D25Q3MII6 688 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 PRPF39Q86UA1 669 aaKnown RBP13.81□□□□□ -0.2
COMMD4-214ENST00000566230 SLC25A45Q8N413 288 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 TMEM63CQ9P1W3 806 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 TPX2Q9ULW0 747 aaKnown RBP13.81□□□□□ -0.2
COMMD4-214ENST00000566230 NAALADL1Q9UQQ1 740 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 TLR6Q9Y2C9 796 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 HECTD1Q9ULT8 2610 aa13.81□□□□□ -0.2
COMMD4-214ENST00000566230 TYW5A2RUC4 315 aaKnown RBP13.8□□□□□ -0.2
COMMD4-214ENST00000566230 CAPN9O14815 690 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 MOCS3O95396 460 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 MOCS2O96007 188 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-214ENST00000566230 MT-CO3P00414 261 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 IL1BP01584 269 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 PAEPP09466 180 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 MAT2AP31153 395 aaKnown RBP13.8□□□□□ -0.2
COMMD4-214ENST00000566230 MTIF2P46199 727 aaKnown RBP13.8□□□□□ -0.2
COMMD4-214ENST00000566230 NUMBP49757 651 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 CXADRP78310 365 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 CFHR1Q03591 330 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 ELAVL3Q14576 367 aaKnown RBP13.8□□□□□ -0.2
COMMD4-214ENST00000566230 STX1AQ16623 288 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 SMYD5Q6GMV2 418 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 TMEM270Q6UE05 265 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 KDM7AQ6ZMT4 941 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 IQCHQ86VS3 1027 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 LGI2Q8N0V4 545 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 FRS2Q8WU20 508 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 HSFY1Q96LI6 401 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 FAM81BQ96LP2 452 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 SERPINB11Q96P15 392 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 NT5C1BQ96P26 610 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 MIS12Q9H081 205 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
COMMD4-214ENST00000566230 CAAP1Q9H8G2 361 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 SARDHQ9UL12 918 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 CA5BQ9Y2D0 317 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 CEP83Q9Y592 693 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 PCDHB1Q9Y5F3 818 aa13.8□□□□□ -0.2
COMMD4-214ENST00000566230 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 M0QYV0 167 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 PLRG1O43660 514 aaKnown RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 EEF1GP26641 437 aaKnown RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 E2F1Q01094 437 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 ZNF211Q13398 564 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-214ENST00000566230 NNTQ13423 1086 aa13.79□□□□□ -0.2
COMMD4-214ENST00000566230 MAN2A1Q16706 1144 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms