RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 NCF1P14598 390 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 GTF2E2P29084 291 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 MARSP56192 900 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SLC20A2Q08357 652 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CYLC2Q14093 348 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SLC29A2Q14542 456 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 INAVAQ3KP66 663 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SPATA20Q8TB22 786 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 KAT2BQ92831 832 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SPATA13Q96N96 652 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 PACSIN1Q9BY11 444 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 IRX2Q9BZI1 471 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ETNK1Q9HBU6 452 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 MPP6Q9NZW5 540 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 USP15Q9Y4E8 981 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 GPSM3Q9Y4H4 160 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 TMEM120BA0PK00 339 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 C16orf96A6NNT2 1141 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 NEDD8-MDP1E9PL57 170 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 GUCA1CO95843 209 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CCNE2O96020 404 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 FAM163BP0C2L3 166 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CCNB1P14635 433 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 IL2P60568 153 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CSHL1Q14406 222 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SLC25A52Q3SY17 297 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 FBXO39Q8N4B4 442 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 WFIKKN2Q8TEU8 576 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 PHF21AQ96BD5 680 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 FUBP3Q96I24 572 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 PRRG3Q9BZD7 231 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ABCG4Q9H172 646 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 PHPT1Q9NRX4 125 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 DUS2Q9NX74 493 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CACNA2D2Q9NY47 1150 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 NOP53Q9NZM5 478 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 RCOR3Q9P2K3 495 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ZNF112Q9UJU3 913 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 BLOC1S6Q9UL45 172 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ZNF214Q9UL59 606 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CHADO15335 359 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CCNT2O60583 730 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ENO1P06733 434 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 MYBL2P10244 700 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ENO3P13929 434 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 RXRGP48443 463 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 MAMLD1Q13495 774 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 PDE12Q6L8Q7 609 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CYP20A1Q6UW02 462 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 RFX8Q6ZV50 586 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 C10orf53Q8N6V4 93 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SUFUQ9UMX1 484 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 NDUFB5O43674 189 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SGTAO43765 313 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 HS6ST1O60243 411 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SLC10A3P09131 477 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 UQCRBP14927 111 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 RRM2P31350 389 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 CLK3P49761 638 aaKnown RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 MBTD1Q05BQ5 628 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 TAF10Q12962 218 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 TIGD5Q53EQ6 642 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SEL1L3Q68CR1 1132 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 TNS4Q8IZW8 715 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 KREMEN2Q8NCW0 462 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SHC3Q92529 594 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SGF29Q96ES7 293 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SNX27Q96L92 541 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ARHGAP28Q9P2N2 729 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 SAE1Q9UBE0 346 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 VTI1BQ9UEU0 232 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 GPN3Q9UHW5 284 aaPredicted RBP6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ADAM21Q9UKJ8 722 aa6.63□□□□□ -1.35
LINC01043-201ENST00000565936 ANKDD1BA6NHY2 528 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 PJA2O43164 708 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 PPP1R37O75864 691 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 ALPPL2P10696 532 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 CPA3P15088 417 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 SKIV2L2P42285 1042 aaKnown RBP6.62□□□□□ -1.35
LINC01043-201ENST00000565936 PEX5P50542 639 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 CDK7P50613 346 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 ICE2Q659A1 982 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 ZNF544Q6NX49 715 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 LCLAT1Q6UWP7 414 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 OTOP3Q7RTS5 596 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 COLGALT2Q8IYK4 626 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 CLYBLQ8N0X4 340 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 AGGF1Q8N302 714 aaeCLIP6.62□□□□□ -1.35
LINC01043-201ENST00000565936 DBF4BQ8NFT6 615 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 PAFAH2Q99487 392 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 TRIM4Q9C037 500 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 ASB8Q9H765 288 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 NUDT5Q9UKK9 219 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 AGO1Q9UL18 857 aaKnown RBP6.62□□□□□ -1.35
LINC01043-201ENST00000565936 RRP15Q9Y3B9 282 aaKnown RBP6.62□□□□□ -1.35
LINC01043-201ENST00000565936 TBC1D3DA0A087WVF3 549 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 TBC1D3IA0A087WXS9 549 aa6.62□□□□□ -1.35
LINC01043-201ENST00000565936 TBC1D3EA0A087X179 549 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms