RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BRD3Q15059 726 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 PDK1Q15118 436 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 C6orf118Q5T5N4 469 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 FYB2Q5VWT5 728 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 RHBDF2Q6PJF5 856 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 TPGS1Q6ZTW0 290 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 SETD3Q86TU7 594 aaPredicted RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 TMEM25Q86YD3 366 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 LRRC49Q8IUZ0 686 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 CCDC117Q8IWD4 279 aaPredicted RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 ARHGAP12Q8IWW6 846 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 ZNF557Q8N988 423 aaPredicted RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 ATP2A3Q93084 1043 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 MAGOHBQ96A72 148 aaKnown RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 OLFM3Q96PB7 478 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 PLA2G2FQ9BZM2 168 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 BRD8Q9H0E9 1235 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 NDFIP2Q9NV92 336 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 ILVBLA1L0T0 632 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 CCDC151A5D8V7 595 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 HACD1B0YJ81 288 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 C2CD4DB7Z1M9 353 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 H0Y626 953 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 PPP1R12AO14974 1030 aaPredicted RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 CHADO15335 359 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 RAMP2O60895 175 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 ZNF189O75820 626 aaPredicted RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 ADH1CP00326 375 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 CYP17A1P05093 508 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 COILP38432 576 aaPredicted RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 OXCT1P55809 520 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 EIF3EP60228 445 aaKnown RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 GAD2Q05329 585 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 C2orf54Q08AI8 447 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 GALNT2Q10471 571 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 DHCR24Q15392 516 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 PARP15Q460N3 678 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 LY6G5CQ5SRR4 150 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 ZNF783Q6ZMS7 281 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 FIBINQ8TAL6 211 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 ATG4AQ8WYN0 398 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 NXPE3Q969Y0 559 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 ASIC4Q96FT7 647 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 P2RY11Q96G91 374 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 CELF6Q96J87 481 aaKnown RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 KXD1Q9BQD3 176 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 TRMT61BQ9BVS5 477 aaKnown RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 BBS2Q9BXC9 721 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 SLC39A8Q9C0K1 460 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 MAGEH1Q9H213 219 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 FEZ2Q9UHY8 353 aaPredicted RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 DNPEPQ9ULA0 475 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 DRG1Q9Y295 367 aaKnown RBP13.23□□□□□ -0.29
SPG7-209ENST00000564047 NUMBLQ9Y6R0 609 aa13.23□□□□□ -0.29
SPG7-209ENST00000564047 RASA4BC9J798 803 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 HOXC11O43248 304 aaPredicted RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 RASA4O43374 803 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 ITGAVP06756 1048 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 RHOCP08134 193 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 RBP3P10745 1247 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 ARSAP15289 507 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 ETFBP38117 255 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 GARSP41250 739 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 ZXDAP98168 799 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 ZNF33AQ06730 810 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 SNX1Q13596 522 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 CDH18Q13634 790 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 BYSLQ13895 437 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 GRM2Q14416 872 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 POLD3Q15054 466 aaPredicted RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 OASLQ15646 514 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 ANO4Q32M45 955 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 SLC45A4Q5BKX6 768 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 TRIM68Q6AZZ1 485 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 CXorf57Q6NSI4 855 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 TTC27Q6P3X3 843 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 CCDC137Q6PK04 289 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 ZC3H18Q86VM9 953 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 CDKL3Q8IVW4 592 aaPredicted RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 MFN1Q8IWA4 741 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 KLHL7Q8IXQ5 586 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 KRT222Q8N1A0 295 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 CARNMT1Q8N4J0 409 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 ST13P5Q8NFI4 369 aaPredicted RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 HNRNPLLQ8WVV9 542 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 ZFYVE19Q96K21 471 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 TSGA13Q96PP4 275 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 FAM118BQ9BPY3 351 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 RPP25Q9BUL9 199 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 DDX47Q9H0S4 455 aaKnown RBP13.22□□□□□ -0.29
SPG7-209ENST00000564047 RAB21Q9UL25 225 aa13.22□□□□□ -0.29
SPG7-209ENST00000564047 BCLAF3A2AJT9 711 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms