RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TRIM69Q86WT6 500 aa19.25■□□□□ 0.67
NME3-204ENST00000563498 CCAR2Q8N163 923 aaKnown RBP19.25■□□□□ 0.67
NME3-204ENST00000563498 LSM14AQ8ND56 463 aaKnown RBP19.25■□□□□ 0.67
NME3-204ENST00000563498 BAP1Q92560 729 aa19.25■□□□□ 0.67
NME3-204ENST00000563498 SMARCE1Q969G3 411 aa19.25■□□□□ 0.67
NME3-204ENST00000563498 PPP1R9BQ96SB3 815 aa19.25■□□□□ 0.67
NME3-204ENST00000563498 PRMT1Q99873 361 aaKnown RBP19.25■□□□□ 0.67
NME3-204ENST00000563498 ASXL3Q9C0F0 2248 aa19.25■□□□□ 0.67
NME3-204ENST00000563498 A0A1B0GVM2 712 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 TCAF2A6NFQ2 919 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 ATXN7O15265 892 aaPredicted RBP19.24■□□□□ 0.67
NME3-204ENST00000563498 SLC2A3P11169 496 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 VAV1P15498 845 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 ACP1P24666 158 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 PPP1R2P41236 205 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 C19orf57Q0VDD7 668 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 CCDC40Q4G0X9 1142 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 TMEM110Q86TL2 294 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 ARHGEF19Q8IW93 802 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 ATP6V0D2Q8N8Y2 350 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 OR8D1Q8WZ84 308 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 MED15Q96RN5 788 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 THAP9Q9H5L6 903 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 GDPD2Q9HCC8 539 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 SLC12A6Q9UHW9 1150 aa19.24■□□□□ 0.67
NME3-204ENST00000563498 HELZ2Q9BYK8 2649 aaKnown RBP19.23■□□□□ 0.67
NME3-204ENST00000563498 ALOX15BO15296 676 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 MED7O43513 233 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 ATP9BO43861 1147 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 RTN2O75298 545 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 PDGFRAP16234 1089 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 STAT4Q14765 748 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 PROX2Q3B8N5 592 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 SETMARQ53H47 684 aaPredicted RBP19.23■□□□□ 0.67
NME3-204ENST00000563498 RABGAP1LQ5R372 815 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 CXorf57Q6NSI4 855 aaKnown RBP19.23■□□□□ 0.67
NME3-204ENST00000563498 DENND1BQ6P3S1 775 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 FOXR2Q6PJQ5 311 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 DCBLD1Q8N8Z6 715 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 EHBP1Q8NDI1 1231 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 SLC39A7Q92504 469 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 FGF11Q92914 225 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 KREMEN1Q96MU8 473 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 HOOK1Q9UJC3 728 aaKnown RBP19.23■□□□□ 0.67
NME3-204ENST00000563498 PPM1HQ9ULR3 514 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 CLCA2Q9UQC9 943 aa19.23■□□□□ 0.67
NME3-204ENST00000563498 E5RJQ4 531 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 C1QTNF3-AMACRE9PGA6 284 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 PRAMEF26H0Y7S4 382 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 MCF2LO15068 1137 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 RNGTTO60942 597 aaKnown RBP19.22■□□□□ 0.67
NME3-204ENST00000563498 METAP1P53582 386 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 E2F1Q01094 437 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 MTA1Q13330 715 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 ZNF211Q13398 564 aaPredicted RBP19.22■□□□□ 0.67
NME3-204ENST00000563498 AGBL4Q5VU57 503 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
NME3-204ENST00000563498 ALG14Q96F25 216 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 SLC25A13Q9UJS0 675 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 SARDHQ9UL12 918 aa19.22■□□□□ 0.67
NME3-204ENST00000563498 MYLKQ15746 1914 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 KRT5P13647 590 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 GLDCP23378 1020 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 MAT2AP31153 395 aaKnown RBP19.21■□□□□ 0.67
NME3-204ENST00000563498 CCR1P32246 355 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 ACTN2P35609 894 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 INSM1Q01101 510 aaPredicted RBP19.21■□□□□ 0.67
NME3-204ENST00000563498 CNTN1Q12860 1018 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 TTI2Q6NXR4 508 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 CIR1Q86X95 450 aaPredicted RBP19.21■□□□□ 0.67
NME3-204ENST00000563498 ZNF606Q8WXB4 792 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 TIGD1Q96MW7 591 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 FCRL3Q96P31 734 aaPredicted RBP19.21■□□□□ 0.67
NME3-204ENST00000563498 FEM1AQ9BSK4 669 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 PREBQ9HCU5 417 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 RAI2Q9Y5P3 530 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 ARID1BQ8NFD5 2236 aaPredicted RBP19.21■□□□□ 0.67
NME3-204ENST00000563498 BPTFQ12830 3046 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 SHROOM3Q8TF72 1996 aa19.21■□□□□ 0.67
NME3-204ENST00000563498 KALRNO60229 2985 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 BRINP1O60477 761 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 C1QL1O75973 258 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 GLI1P08151 1106 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 PITX1P78337 314 aaPredicted RBP19.2■□□□□ 0.66
NME3-204ENST00000563498 CDK17Q00537 523 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 ACCSLQ4AC99 568 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 FBXL22Q6P050 247 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 NEK5Q6P3R8 708 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 SLC25A45Q8N413 288 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 TMEM145Q8NBT3 493 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 KLHDC7BQ96G42 594 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 FAM204AQ9H8W3 233 aa19.2■□□□□ 0.66
NME3-204ENST00000563498 PTPRQQ9UMZ3 2332 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 TEX51A0A1B0GUA7 166 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 GOLGA6L4A6NEF3 574 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 TRIM38O00635 465 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 SIGLEC6O43699 453 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 LETM1O95202 739 aaPredicted RBP19.19■□□□□ 0.66
NME3-204ENST00000563498 GNA14O95837 355 aa19.19■□□□□ 0.66
NME3-204ENST00000563498 PRB1P04280 392 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms